Chr11.g76441

Functional evidence

eggNOG

4432.XP_010243229.1,K,[Transcription elongation factor SPT5]

Gene Ontology

Transcription elongation factor SPT5 | GO:0006139//nucleobase-containing compound metabolic process; GO:0006259//DNA metabolic process; GO:0006304//DNA modification; GO:0006305//DNA alkylation; GO:0006306//DNA methylation; GO:0006325//chromatin organization; GO:0006342//chromatin silencing; GO:0006351//transcription, DNA-templated; GO:0006354//DNA-templated transcription, elongation; GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006366//transcription from RNA polymerase II promoter; GO:0006368//transcription elongation from RNA polymerase II promoter; GO:0006396//RNA processing; GO:0006397//mRNA processing; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006996//organelle organization; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009058//biosynthetic process; GO:0009059//macromolecule biosynthetic process; GO:0009889//regulation of biosynthetic process; GO:0009890//negative regulation of biosynthetic process; GO:0009892//negative regulation of metabolic process; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010467//gene expression; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010558//negative regulation of macromolecule biosynthetic process; GO:0010605//negative regulation of macromolecule metabolic process; GO:0010608//posttranscriptional regulation of gene expression; GO:0010629//negative regulation of gene expression; GO:0014070//response to organic cyclic compound; GO:0016043//cellular component organization; GO:0016070//RNA metabolic process; GO:0016071//mRNA metabolic process; GO:0016246//RNA interference; GO:0016441//posttranscriptional gene silencing; GO:0016458//gene silencing; GO:0018130//heterocycle biosynthetic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0019438//aromatic compound biosynthetic process; GO:0030422//production of siRNA involved in RNA interference; GO:0031047//gene silencing by RNA; GO:0031050//dsRNA fragmentation; GO:0031323//regulation of cellular metabolic process; GO:0031324//negative regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031327//negative regulation of cellular biosynthetic process; GO:0032259//methylation; GO:0032774//RNA biosynthetic process; GO:0034641//cellular nitrogen compound metabolic process; GO:0034645//cellular macromolecule biosynthetic process; GO:0034654//nucleobase-containing compound biosynthetic process; GO:0035194//posttranscriptional gene silencing by RNA; GO:0040029//regulation of gene expression, epigenetic; GO:0042221//response to chemical; GO:0043170//macromolecule metabolic process; GO:0043331//response to dsRNA; GO:0043412//macromolecule modification; GO:0043414//macromolecule methylation; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044249//cellular biosynthetic process; GO:0044260//cellular macromolecule metabolic process; GO:0044271//cellular nitrogen compound biosynthetic process; GO:0044728//DNA methylation or demethylation; GO:0045814//negative regulation of gene expression, epigenetic; GO:0045892//negative regulation of transcription, DNA-templated; GO:0045934//negative regulation of nucleobase-containing compound metabolic process; GO:0046483//heterocycle metabolic process; GO:0048519//negative regulation of biological process; GO:0048523//negative regulation of cellular process; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051172//negative regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051253//negative regulation of RNA metabolic process; GO:0051276//chromosome organization; GO:0051716//cellular response to stimulus; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0070887//cellular response to chemical stimulus; GO:0070918//production of small RNA involved in gene silencing by RNA; GO:0071310//cellular response to organic substance; GO:0071359//cellular response to dsRNA; GO:0071407//cellular response to organic cyclic compound; GO:0071704//organic substance metabolic process; GO:0071840//cellular component organization or biogenesis; GO:0080090//regulation of primary metabolic process; GO:0080188//RNA-directed DNA methylation; GO:0090304//nucleic acid metabolic process; GO:0097659//nucleic acid-templated transcription; GO:1901360//organic cyclic compound metabolic process; GO:1901362//organic cyclic compound biosynthetic process; GO:1901576//organic substance biosynthetic process; GO:1901698//response to nitrogen compound; GO:1901699//cellular response to nitrogen compound; GO:1902679//negative regulation of RNA biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903507//negative regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2000113//negative regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005654//nucleoplasm; GO:0008023//transcription elongation factor complex; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0032044//DSIF complex; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044451//nucleoplasm part; GO:0044464//cell part; GO:0070013//intracellular organelle lumen | GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003682//chromatin binding; GO:0003723//RNA binding; GO:0003729//mRNA binding; GO:0005488//binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding

NR

RWR92246.1 protein RNA-directed DNA methylation 3 isoform X2 [Cinnamomum micranthum f. kanehirae]

Swiss-Prot

F4JW79.1 RecName: Full=Protein RNA-directed DNA methylation 3; AltName: Full=KOW domain-containing transcription factor 1; AltName: Full=Protein SPT5-like [Arabidopsis thaliana]