Feature identity
- Identifier
- PaHa01g30110.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,256 bp
- Genomic location
- 1:78,410,179–78,438,344
- Strand
- +
Hass · mRNA
PaHa01g30110.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,256
- bp
- 1:78,410,179–78,438,344
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g30110
- eggNOG
- Preferred name: ERF5 | Seed ortholog: 337451.A0A3S3NIZ9 | COG: S | eggNOG OG: AP2@131567|Eb-12, AP2@1437183|hb-20!, AP2@33090|Hk-14
- Gene Ontology
- GO:0000302 response to reactive oxygen species; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat; GO:0009409 response to cold; GO:0009624 response to nematode; GO:0009644 response to high light intensity; GO:0009733 response to auxin; GO:0009873 ethylene-activated signaling pathway; GO:0010087 phloem or xylem histogenesis; GO:0045893 positive regulation of DNA-templated transcription; GO:0050832 defense response to fungus; GO:0051301 cell division; GO:0070482 response to oxygen levels
- KEGG
- KO: K09286 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g30110.1-protein
derives_frommRNAPaHa01g30110.1
mRNAPaHa01g30110.1
part_ofgenePaHa01g30110
CDS
part_ofPaHa01g30110.1-CDS-1-1787993825:78410179..78411039mRNAPaHa01g30110.1
CDS
part_ofPaHa01g30110.1-CDS-1-1787993825:78419028..78419131mRNAPaHa01g30110.1
CDS
part_ofPaHa01g30110.1-CDS-1-1787993825:78419519..78419617mRNAPaHa01g30110.1
CDS
part_ofPaHa01g30110.1-CDS-1-1787993825:78421218..78421269mRNAPaHa01g30110.1
CDS
part_ofPaHa01g30110.1-CDS-1-1787993825:78421897..78422031mRNAPaHa01g30110.1
CDS
part_ofPaHa01g30110.1-CDS-1-1787993825:78427771..78427823mRNAPaHa01g30110.1
CDS
part_ofPaHa01g30110.1-CDS-1-1787993825:78428000..78428075mRNAPaHa01g30110.1
CDS
part_ofPaHa01g30110.1-CDS-1-1787993825:78428175..78428381mRNAPaHa01g30110.1
CDS
part_ofPaHa01g30110.1-CDS-1-1787993825:78437002..78437211mRNAPaHa01g30110.1
CDS
part_ofPaHa01g30110.1-CDS-1-1787993825:78437591..78437773mRNAPaHa01g30110.1
CDS
part_ofPaHa01g30110.1-CDS-1-1787993825:78437886..78438064mRNAPaHa01g30110.1
CDS
part_ofPaHa01g30110.1-CDS-1-1787993825:78438248..78438344mRNAPaHa01g30110.1
exon
part_ofPaHa01g30110.1-exon-1-1787993825:78410179..78411039mRNAPaHa01g30110.1
exon
part_ofPaHa01g30110.1-exon-1-1787993825:78419028..78419131mRNAPaHa01g30110.1
exon
part_ofPaHa01g30110.1-exon-1-1787993825:78419519..78419617mRNAPaHa01g30110.1
exon
part_ofPaHa01g30110.1-exon-1-1787993825:78421218..78421269mRNAPaHa01g30110.1
exon
part_ofPaHa01g30110.1-exon-1-1787993825:78421897..78422031mRNAPaHa01g30110.1
exon
part_ofPaHa01g30110.1-exon-1-1787993825:78427771..78427823mRNAPaHa01g30110.1
exon
part_ofPaHa01g30110.1-exon-1-1787993825:78428000..78428075mRNAPaHa01g30110.1
exon
part_ofPaHa01g30110.1-exon-1-1787993825:78428175..78428381mRNAPaHa01g30110.1
exon
part_ofPaHa01g30110.1-exon-1-1787993825:78437002..78437211mRNAPaHa01g30110.1
exon
part_ofPaHa01g30110.1-exon-1-1787993825:78437591..78437773mRNAPaHa01g30110.1
exon
part_ofPaHa01g30110.1-exon-1-1787993825:78437886..78438064mRNAPaHa01g30110.1
exon
part_ofPaHa01g30110.1-exon-1-1787993825:78438248..78438344mRNAPaHa01g30110.1
