Feature identity
- Identifier
- PaHa10g15060.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,485 bp
- Genomic location
- 10:42,991,428–43,001,518
- Strand
- +
Hass · mRNA
PaHa10g15060.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,485
- bp
- 10:42,991,428–43,001,518
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g15060
- eggNOG
- Preferred name: LOC107961028 | Seed ortholog: 337451.A0A3S3R3S3 | COG: S | eggNOG OG: zf-CCCH@131567|Abn-26, zf-CCCH@1437183|HAe-42, zf-CCCH@58023|GYX-41
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription
- KEGG
- KO: K18753 | BRITE: 00001, 03019
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g15060.1-protein
derives_frommRNAPaHa10g15060.1
mRNAPaHa10g15060.1
part_ofgenePaHa10g15060
CDS
part_ofPaHa10g15060.1-CDS-10-1787993825:42991428..42991831mRNAPaHa10g15060.1
CDS
part_ofPaHa10g15060.1-CDS-10-1787993825:42999138..42999164mRNAPaHa10g15060.1
CDS
part_ofPaHa10g15060.1-CDS-10-1787993825:42999462..43000209mRNAPaHa10g15060.1
CDS
part_ofPaHa10g15060.1-CDS-10-1787993825:43001213..43001518mRNAPaHa10g15060.1
exon
part_ofPaHa10g15060.1-exon-10-1787993825:42991428..42991831mRNAPaHa10g15060.1
exon
part_ofPaHa10g15060.1-exon-10-1787993825:42999138..42999164mRNAPaHa10g15060.1
exon
part_ofPaHa10g15060.1-exon-10-1787993825:42999462..43000209mRNAPaHa10g15060.1
exon
part_ofPaHa10g15060.1-exon-10-1787993825:43001213..43001518mRNAPaHa10g15060.1
