Feature identity
- Identifier
- PaHa10g16670.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 315 bp
- Genomic location
- 10:45,345,091–45,352,176
- Strand
- −
Hass · mRNA
PaHa10g16670.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 315
- bp
- 10:45,345,091–45,352,176
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g16670
- eggNOG
- Preferred name: HSBP | Seed ortholog: 180675.A0A4D8ZY66 | COG: S | eggNOG OG: HSBP1@131567|A-1, HSBP1@3398|Cx-11
- Gene Ontology
- GO:0005515 protein binding; GO:0005634 nucleus; GO:0005794 Golgi apparatus; GO:0005829 cytosol; GO:0009408 response to heat; GO:0010520 regulation of reciprocal meiotic recombination; GO:0031072 heat shock protein binding; GO:0048316 seed development; GO:0070370 cellular heat acclimation; GO:0140297 DNA-binding transcription factor binding
- KEGG
- KO: K19765 | Pathway: 04212 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g16670.1-protein
derives_frommRNAPaHa10g16670.1
mRNAPaHa10g16670.1
part_ofgenePaHa10g16670
CDS
part_ofPaHa10g16670.1-CDS-10-1787993825:45345091..45345266mRNAPaHa10g16670.1
CDS
part_ofPaHa10g16670.1-CDS-10-1787993825:45346513..45346570mRNAPaHa10g16670.1
CDS
part_ofPaHa10g16670.1-CDS-10-1787993825:45346644..45346667mRNAPaHa10g16670.1
CDS
part_ofPaHa10g16670.1-CDS-10-1787993825:45346940..45346993mRNAPaHa10g16670.1
CDS
part_ofPaHa10g16670.1-CDS-10-1787993825:45352174..45352176mRNAPaHa10g16670.1
exon
part_ofPaHa10g16670.1-exon-10-1787993825:45345091..45345266mRNAPaHa10g16670.1
exon
part_ofPaHa10g16670.1-exon-10-1787993825:45346513..45346570mRNAPaHa10g16670.1
exon
part_ofPaHa10g16670.1-exon-10-1787993825:45346644..45346667mRNAPaHa10g16670.1
exon
part_ofPaHa10g16670.1-exon-10-1787993825:45346940..45346993mRNAPaHa10g16670.1
exon
part_ofPaHa10g16670.1-exon-10-1787993825:45352174..45352176mRNAPaHa10g16670.1
