Anise · gene

Chr09.g68335

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

10,432
bp
Chr09:48,474,794–48,485,225
genomic location
Record overview

Feature identity

Identifier
Chr09.g68335
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
10,432 bp
Genomic location
Chr09:48,474,794–48,485,225
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010273878.1,K,[Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)]
Gene Ontology
Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs) | GO:0006355//regulation of transcription, DNA-templated; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0009653//anatomical structure morphogenesis; GO:0009719//response to endogenous stimulus; GO:0009723//response to ethylene; GO:0009725//response to hormone; GO:0009733//response to auxin; GO:0009791//post-embryonic development; GO:0009889//regulation of biosynthetic process; GO:0010015//root morphogenesis; GO:0010033//response to organic substance; GO:0010101//post-embryonic root morphogenesis; GO:0010102//lateral root morphogenesis; GO:0010311//lateral root formation; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0022622//root system development; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0042221//response to chemical; GO:0048364//root development; GO:0048366//leaf development; GO:0048367//shoot system development; GO:0048527//lateral root development; GO:0048528//post-embryonic root development; GO:0048646//anatomical structure formation involved in morphogenesis; GO:0048731//system development; GO:0048827//phyllome development; GO:0048856//anatomical structure development; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0080090//regulation of primary metabolic process; GO:0090696//post-embryonic plant organ development; GO:0090697//post-embryonic plant organ morphogenesis; GO:0090698//post-embryonic plant morphogenesis; GO:0099402//plant organ development; GO:1903506//regulation of nucleic acid-templated transcription; GO:1905392//plant organ morphogenesis; GO:1905393//plant organ formation; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0005515//protein binding; GO:0043565//sequence-specific DNA binding; GO:0046983//protein dimerization activity; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
KEGG
K14486 | K14486, ARF
NR
RWR95862.1 AUX/IAA protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
A3B9A0.1 RecName: Full=Auxin response factor 16 [Oryza sativa Japonica Group]
Biological context

Connected feature records

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