Feature identity
- Identifier
- PaHa10g18960.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 684 bp
- Genomic location
- 10:48,383,738–48,386,492
- Strand
- +
Hass · mRNA
PaHa10g18960.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 684
- bp
- 10:48,383,738–48,386,492
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa10g18960
- eggNOG
- Preferred name: BHLH148 | Seed ortholog: 337451.A0A3S3NFY0 | COG: S | eggNOG OG: UNK.FBJB@131567|A-1*, UNK.FBJB@3398|d-6
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0006979 response to oxidative stress; GO:0009651 response to salt stress; GO:0009742 brassinosteroid mediated signaling pathway; GO:0042542 response to hydrogen peroxide; GO:0043565 sequence-specific DNA binding
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa10g18960.1-protein
derives_frommRNAPaHa10g18960.1
mRNAPaHa10g18960.1
part_ofgenePaHa10g18960
CDS
part_ofPaHa10g18960.1-CDS-10-1787993825:48383738..48384128mRNAPaHa10g18960.1
CDS
part_ofPaHa10g18960.1-CDS-10-1787993825:48384200..48384285mRNAPaHa10g18960.1
CDS
part_ofPaHa10g18960.1-CDS-10-1787993825:48386042..48386067mRNAPaHa10g18960.1
CDS
part_ofPaHa10g18960.1-CDS-10-1787993825:48386312..48386492mRNAPaHa10g18960.1
exon
part_ofPaHa10g18960.1-exon-10-1787993825:48383738..48384128mRNAPaHa10g18960.1
exon
part_ofPaHa10g18960.1-exon-10-1787993825:48384200..48384285mRNAPaHa10g18960.1
exon
part_ofPaHa10g18960.1-exon-10-1787993825:48386042..48386067mRNAPaHa10g18960.1
exon
part_ofPaHa10g18960.1-exon-10-1787993825:48386312..48386492mRNAPaHa10g18960.1
