Feature identity
- Identifier
- PaHa01g30570.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,373 bp
- Genomic location
- 1:79,405,096–79,410,310
- Strand
- −
Hass · mRNA
PaHa01g30570.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,373
- bp
- 1:79,405,096–79,410,310
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g30570
- eggNOG
- Preferred name: SCL6 | Seed ortholog: 337451.A0A3S3NJ24 | COG: S | eggNOG OG: GRAS@131567|n-8, GRAS@3193|CH-12, GRAS@3398|JO-16, GRAS@58023|DN-13
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0030154 cell differentiation; GO:0048768 root hair cell tip growth; GO:0051301 cell division
- KEGG
- KO: K27747 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g30570.1-protein
derives_frommRNAPaHa01g30570.1
mRNAPaHa01g30570.1
part_ofgenePaHa01g30570
CDS
part_ofPaHa01g30570.1-CDS-1-1787993825:79405096..79405204mRNAPaHa01g30570.1
CDS
part_ofPaHa01g30570.1-CDS-1-1787993825:79406392..79406536mRNAPaHa01g30570.1
CDS
part_ofPaHa01g30570.1-CDS-1-1787993825:79406620..79407130mRNAPaHa01g30570.1
CDS
part_ofPaHa01g30570.1-CDS-1-1787993825:79407275..79408753mRNAPaHa01g30570.1
CDS
part_ofPaHa01g30570.1-CDS-1-1787993825:79408921..79408955mRNAPaHa01g30570.1
CDS
part_ofPaHa01g30570.1-CDS-1-1787993825:79410217..79410310mRNAPaHa01g30570.1
exon
part_ofPaHa01g30570.1-exon-1-1787993825:79405096..79405204mRNAPaHa01g30570.1
exon
part_ofPaHa01g30570.1-exon-1-1787993825:79406392..79406536mRNAPaHa01g30570.1
exon
part_ofPaHa01g30570.1-exon-1-1787993825:79406620..79407130mRNAPaHa01g30570.1
exon
part_ofPaHa01g30570.1-exon-1-1787993825:79407275..79408753mRNAPaHa01g30570.1
exon
part_ofPaHa01g30570.1-exon-1-1787993825:79408921..79408955mRNAPaHa01g30570.1
exon
part_ofPaHa01g30570.1-exon-1-1787993825:79410217..79410310mRNAPaHa01g30570.1
