Chr09.g67782

Functional evidence

eggNOG

3983.cassava4.1_003184m,K,[RNA polymerase-associated protein]

Gene Ontology

RNA polymerase-associated protein | GO:0000122//negative regulation of transcription from RNA polymerase II promoter; GO:0001701//in utero embryonic development; GO:0001704//formation of primary germ layer; GO:0001706//endoderm formation; GO:0001711//endodermal cell fate commitment; GO:0001824//blastocyst development; GO:0001832//blastocyst growth; GO:0006325//chromatin organization; GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006464//cellular protein modification process; GO:0006479//protein methylation; GO:0006807//nitrogen compound metabolic process; GO:0006996//organelle organization; GO:0007275//multicellular organism development; GO:0007369//gastrulation; GO:0007492//endoderm development; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008213//protein alkylation; GO:0009653//anatomical structure morphogenesis; GO:0009790//embryo development; GO:0009792//embryo development ending in birth or egg hatching; GO:0009888//tissue development; GO:0009889//regulation of biosynthetic process; GO:0009890//negative regulation of biosynthetic process; GO:0009891//positive regulation of biosynthetic process; GO:0009892//negative regulation of metabolic process; GO:0009893//positive regulation of metabolic process; GO:0009909//regulation of flower development; GO:0009910//negative regulation of flower development; GO:0009987//cellular process; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010557//positive regulation of macromolecule biosynthetic process; GO:0010558//negative regulation of macromolecule biosynthetic process; GO:0010604//positive regulation of macromolecule metabolic process; GO:0010605//negative regulation of macromolecule metabolic process; GO:0010628//positive regulation of gene expression; GO:0010629//negative regulation of gene expression; GO:0010638//positive regulation of organelle organization; GO:0016043//cellular component organization; GO:0016569//covalent chromatin modification; GO:0016570//histone modification; GO:0016571//histone methylation; GO:0018022//peptidyl-lysine methylation; GO:0018023//peptidyl-lysine trimethylation; GO:0018193//peptidyl-amino acid modification; GO:0018205//peptidyl-lysine modification; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0019538//protein metabolic process; GO:0019827//stem cell population maintenance; GO:0030154//cell differentiation; GO:0031056//regulation of histone modification; GO:0031058//positive regulation of histone modification; GO:0031060//regulation of histone methylation; GO:0031062//positive regulation of histone methylation; GO:0031323//regulation of cellular metabolic process; GO:0031324//negative regulation of cellular metabolic process; GO:0031325//positive regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031327//negative regulation of cellular biosynthetic process; GO:0031328//positive regulation of cellular biosynthetic process; GO:0031399//regulation of protein modification process; GO:0031401//positive regulation of protein modification process; GO:0032259//methylation; GO:0032268//regulation of cellular protein metabolic process; GO:0032270//positive regulation of cellular protein metabolic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0032784//regulation of DNA-templated transcription, elongation; GO:0032786//positive regulation of DNA-templated transcription, elongation; GO:0032968//positive regulation of transcription elongation from RNA polymerase II promoter; GO:0033043//regulation of organelle organization; GO:0033044//regulation of chromosome organization; GO:0034243//regulation of transcription elongation from RNA polymerase II promoter; GO:0034968//histone lysine methylation; GO:0035987//endodermal cell differentiation; GO:0036211//protein modification process; GO:0040007//growth; GO:0043009//chordate embryonic development; GO:0043170//macromolecule metabolic process; GO:0043412//macromolecule modification; GO:0043414//macromolecule methylation; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044260//cellular macromolecule metabolic process; GO:0044267//cellular protein metabolic process; GO:0045165//cell fate commitment; GO:0045892//negative regulation of transcription, DNA-templated; GO:0045893//positive regulation of transcription, DNA-templated; GO:0045934//negative regulation of nucleobase-containing compound metabolic process; GO:0045935//positive regulation of nucleobase-containing compound metabolic process; GO:0045944//positive regulation of transcription from RNA polymerase II promoter; GO:0048518//positive regulation of biological process; GO:0048519//negative regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0048523//negative regulation of cellular process; GO:0048580//regulation of post-embryonic development; GO:0048581//negative regulation of post-embryonic development; GO:0048589//developmental growth; GO:0048598//embryonic morphogenesis; GO:0048646//anatomical structure formation involved in morphogenesis; GO:0048831//regulation of shoot system development; GO:0048856//anatomical structure development; GO:0048869//cellular developmental process; GO:0050789//regulation of biological process; GO:0050793//regulation of developmental process; GO:0050794//regulation of cellular process; GO:0051093//negative regulation of developmental process; GO:0051128//regulation of cellular component organization; GO:0051130//positive regulation of cellular component organization; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051172//negative regulation of nitrogen compound metabolic process; GO:0051173//positive regulation of nitrogen compound metabolic process; GO:0051239//regulation of multicellular organismal process; GO:0051241//negative regulation of multicellular organismal process; GO:0051246//regulation of protein metabolic process; GO:0051247//positive regulation of protein metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051253//negative regulation of RNA metabolic process; GO:0051254//positive regulation of RNA metabolic process; GO:0051276//chromosome organization; GO:0051568//histone H3-K4 methylation; GO:0051569//regulation of histone H3-K4 methylation; GO:0051571//positive regulation of histone H3-K4 methylation; GO:0060255//regulation of macromolecule metabolic process; GO:0060795//cell fate commitment involved in formation of primary germ layer; GO:0065007//biological regulation; GO:0071704//organic substance metabolic process; GO:0071840//cellular component organization or biogenesis; GO:0080090//regulation of primary metabolic process; GO:0080182//histone H3-K4 trimethylation; GO:0098727//maintenance of cell number; GO:1901564//organonitrogen compound metabolic process; GO:1902275//regulation of chromatin organization; GO:1902679//negative regulation of RNA biosynthetic process; GO:1902680//positive regulation of RNA biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903507//negative regulation of nucleic acid-templated transcription; GO:1903508//positive regulation of nucleic acid-templated transcription; GO:1905269//positive regulation of chromatin organization; GO:2000026//regulation of multicellular organismal development; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2000113//negative regulation of cellular macromolecule biosynthetic process; GO:2000241//regulation of reproductive process; GO:2000242//negative regulation of reproductive process; GO:2001141//regulation of RNA biosynthetic process; GO:2001252//positive regulation of chromosome organization | GO:0000428//DNA-directed RNA polymerase complex; GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005654//nucleoplasm; GO:0005730//nucleolus; GO:0008023//transcription elongation factor complex; GO:0016591//DNA-directed RNA polymerase II, holoenzyme; GO:0016593//Cdc73/Paf1 complex; GO:0030880//RNA polymerase complex; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043228//non-membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043232//intracellular non-membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044451//nucleoplasm part; GO:0044464//cell part; GO:0055029//nuclear DNA-directed RNA polymerase complex; GO:0061695//transferase complex, transferring phosphorus-containing groups; GO:0070013//intracellular organelle lumen; GO:1902494//catalytic complex; GO:1990234//transferase complex | GO:0000988//transcription factor activity, protein binding; GO:0000989//transcription factor activity, transcription factor binding; GO:0000993//RNA polymerase II core binding; GO:0001076//transcription factor activity, RNA polymerase II transcription factor binding; GO:0001098//basal transcription machinery binding; GO:0001099//basal RNA polymerase II transcription machinery binding; GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003697//single-stranded DNA binding; GO:0005488//binding; GO:0005515//protein binding; GO:0019899//enzyme binding; GO:0043175//RNA polymerase core enzyme binding; GO:0044877//macromolecular complex binding; GO:0045309//protein phosphorylated amino acid binding; GO:0050815//phosphoserine binding; GO:0051219//phosphoprotein binding; GO:0070063//RNA polymerase binding; GO:0097159//organic cyclic compound binding; GO:0099122//RNA polymerase II C-terminal domain binding; GO:1901363//heterocyclic compound binding; GO:1990269//RNA polymerase II C-terminal domain phosphoserine binding

KEGG

K15178 | RTF1

NR

XP_034698315.1 protein RTF1 homolog [Vitis riparia]

Swiss-Prot

Q9C950.1 RecName: Full=Protein RTF1 homolog; AltName: Full=Protein VERNALIZATION INDEPENDENCE 5 [Arabidopsis thaliana]