Anise · gene

Chr06.g44647

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

7,306
bp
Chr06:11,772,435–11,779,740
genomic location
Record overview

Feature identity

Identifier
Chr06.g44647
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
7,306 bp
Genomic location
Chr06:11,772,435–11,779,740
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010276663.1,J,[Peptidyl-tRNA hydrolase ICT1]
Gene Ontology
Peptidyl-tRNA hydrolase ICT1 | GO:0006412//translation; GO:0006414//translational elongation; GO:0006415//translational termination; GO:0006417//regulation of translation; GO:0006518//peptide metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009058//biosynthetic process; GO:0009059//macromolecule biosynthetic process; GO:0009889//regulation of biosynthetic process; GO:0009987//cellular process; GO:0010467//gene expression; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010608//posttranscriptional regulation of gene expression; GO:0016043//cellular component organization; GO:0019222//regulation of metabolic process; GO:0019538//protein metabolic process; GO:0022411//cellular component disassembly; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0032268//regulation of cellular protein metabolic process; GO:0032543//mitochondrial translation; GO:0032984//macromolecular complex disassembly; GO:0034248//regulation of cellular amide metabolic process; GO:0034641//cellular nitrogen compound metabolic process; GO:0034645//cellular macromolecule biosynthetic process; GO:0043043//peptide biosynthetic process; GO:0043170//macromolecule metabolic process; GO:0043603//cellular amide metabolic process; GO:0043604//amide biosynthetic process; GO:0043624//cellular protein complex disassembly; GO:0043933//macromolecular complex subunit organization; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044249//cellular biosynthetic process; GO:0044260//cellular macromolecule metabolic process; GO:0044267//cellular protein metabolic process; GO:0044271//cellular nitrogen compound biosynthetic process; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051246//regulation of protein metabolic process; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0070126//mitochondrial translational termination; GO:0071704//organic substance metabolic process; GO:0071840//cellular component organization or biogenesis; GO:0072344//rescue of stalled ribosome; GO:0080090//regulation of primary metabolic process; GO:1901564//organonitrogen compound metabolic process; GO:1901566//organonitrogen compound biosynthetic process; GO:1901576//organic substance biosynthetic process; GO:2000112//regulation of cellular macromolecule biosynthetic process | GO:0000313//organellar ribosome; GO:0000315//organellar large ribosomal subunit; GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005737//cytoplasm; GO:0005739//mitochondrion; GO:0005759//mitochondrial matrix; GO:0005761//mitochondrial ribosome; GO:0005762//mitochondrial large ribosomal subunit; GO:0005840//ribosome; GO:0015934//large ribosomal subunit; GO:0031974//membrane-enclosed lumen; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043228//non-membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043232//intracellular non-membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044391//ribosomal subunit; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044429//mitochondrial part; GO:0044444//cytoplasmic part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0070013//intracellular organelle lumen; GO:0098798//mitochondrial protein complex; GO:1990904//ribonucleoprotein complex | GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003723//RNA binding; GO:0003747//translation release factor activity; GO:0003824//catalytic activity; GO:0004045//aminoacyl-tRNA hydrolase activity; GO:0005488//binding; GO:0008079//translation termination factor activity; GO:0008135//translation factor activity, RNA binding; GO:0016150//translation release factor activity, codon nonspecific; GO:0016787//hydrolase activity; GO:0016788//hydrolase activity, acting on ester bonds; GO:0052689//carboxylic ester hydrolase activity; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
KEGG
K15033 | ICT1
NR
RWR89290.1 peptidyl-tRNA hydrolase ICT1, mitochondrial [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q8R035.1 RecName: Full=Peptidyl-tRNA hydrolase ICT1, mitochondrial; AltName: Full=39S ribosomal protein L58, mitochondrial; Short=MRP-L58; AltName: Full=Immature colon carcinoma transcript 1 protein homolog; Flags: Precursor [Mus musculus]
Biological context

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