Anise · gene

Chr06.g44585

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

4,251
bp
Chr06:11,002,384–11,006,634
genomic location
Record overview

Feature identity

Identifier
Chr06.g44585
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
4,251 bp
Genomic location
Chr06:11,002,384–11,006,634
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4155.Migut.H00865.1.p,K,[Transcription factor IIIB 50 kDa]
Gene Ontology
Transcription factor IIIB 50 kDa | GO:0000003//reproduction; GO:0003006//developmental process involved in reproduction; GO:0006355//regulation of transcription, DNA-templated; GO:0006359//regulation of transcription from RNA polymerase III promoter; GO:0006950//response to stress; GO:0006979//response to oxidative stress; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0009790//embryo development; GO:0009791//post-embryonic development; GO:0009793//embryo development ending in seed dormancy; GO:0009846//pollen germination; GO:0009856//pollination; GO:0009889//regulation of biosynthetic process; GO:0009987//cellular process; GO:0010154//fruit development; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0022414//reproductive process; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0033554//cellular response to stress; GO:0034599//cellular response to oxidative stress; GO:0042221//response to chemical; GO:0044706//multi-multicellular organism process; GO:0048316//seed development; GO:0048608//reproductive structure development; GO:0048731//system development; GO:0048856//anatomical structure development; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051704//multi-organism process; GO:0051716//cellular response to stimulus; GO:0060255//regulation of macromolecule metabolic process; GO:0061458//reproductive system development; GO:0065007//biological regulation; GO:0070887//cellular response to chemical stimulus; GO:0080090//regulation of primary metabolic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0000126//transcription factor TFIIIB complex; GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005667//transcription factor complex; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0044798//nuclear transcription factor complex; GO:0090576//RNA polymerase III transcription factor complex | GO:0001016//RNA polymerase III regulatory region DNA binding; GO:0001032//RNA polymerase III type 3 promoter DNA binding; GO:0001067//regulatory region nucleic acid binding; GO:0001085//RNA polymerase II transcription factor binding; GO:0001091//RNA polymerase II basal transcription factor binding; GO:0001093//TFIIB-class transcription factor binding; GO:0001098//basal transcription machinery binding; GO:0001099//basal RNA polymerase II transcription machinery binding; GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003690//double-stranded DNA binding; GO:0005488//binding; GO:0005515//protein binding; GO:0008134//transcription factor binding; GO:0019899//enzyme binding; GO:0042802//identical protein binding; GO:0042803//protein homodimerization activity; GO:0044212//transcription regulatory region DNA binding; GO:0046983//protein dimerization activity; GO:0070063//RNA polymerase binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
KEGG
K15196 | BRF1, GTF3B
NR
RWR78286.1 Transcription factor TFIIB [Cinnamomum micranthum f. kanehirae]
Biological context

Connected feature records

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