Anise · gene

Chr04.g35985

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

1,369
bp
Chr04:57,807,918–57,809,286
genomic location
Record overview

Feature identity

Identifier
Chr04.g35985
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
1,369 bp
Genomic location
Chr04:57,807,918–57,809,286
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
3983.cassava4.1_027612m,K,[SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains]
Gene Ontology
SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains | GO:0001101//response to acid chemical; GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0008150//biological_process; GO:0009719//response to endogenous stimulus; GO:0009725//response to hormone; GO:0009733//response to auxin; GO:0009737//response to abscisic acid; GO:0009751//response to salicylic acid; GO:0009889//regulation of biosynthetic process; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0014070//response to organic cyclic compound; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0030154//cell differentiation; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0032502//developmental process; GO:0032870//cellular response to hormone stimulus; GO:0033993//response to lipid; GO:0042221//response to chemical; GO:0042493//response to drug; GO:0046677//response to antibiotic; GO:0048519//negative regulation of biological process; GO:0048580//regulation of post-embryonic development; GO:0048581//negative regulation of post-embryonic development; GO:0048869//cellular developmental process; GO:0050789//regulation of biological process; GO:0050793//regulation of developmental process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051093//negative regulation of developmental process; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051239//regulation of multicellular organismal process; GO:0051241//negative regulation of multicellular organismal process; GO:0051252//regulation of RNA metabolic process; GO:0051716//cellular response to stimulus; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0070887//cellular response to chemical stimulus; GO:0071310//cellular response to organic substance; GO:0071365//cellular response to auxin stimulus; GO:0071495//cellular response to endogenous stimulus; GO:0080090//regulation of primary metabolic process; GO:0097305//response to alcohol; GO:1901332//negative regulation of lateral root development; GO:1901700//response to oxygen-containing compound; GO:1903506//regulation of nucleic acid-templated transcription; GO:2000023//regulation of lateral root development; GO:2000026//regulation of multicellular organismal development; GO:2000069//regulation of post-embryonic root development; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2000280//regulation of root development; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005737//cytoplasm; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part | GO:0000981//RNA polymerase II transcription factor activity, sequence-specific DNA binding; GO:0000988//transcription factor activity, protein binding; GO:0000989//transcription factor activity, transcription factor binding; GO:0001067//regulatory region nucleic acid binding; GO:0001076//transcription factor activity, RNA polymerase II transcription factor binding; GO:0001134//transcription factor activity, transcription factor recruiting; GO:0001135//transcription factor activity, RNA polymerase II transcription factor recruiting; GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0043565//sequence-specific DNA binding; GO:0044212//transcription regulatory region DNA binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
KEGG
K09422 | MYBP
NR
RWR89909.1 transcription factor MYB16 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9S9Z2.1 RecName: Full=Transcription factor MYB93; AltName: Full=Myb-related protein 93; Short=AtMYB93 [Arabidopsis thaliana]
Biological context

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