Feature identity
- Identifier
- PaHa11g11140.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 666 bp
- Genomic location
- 11:36,903,761–36,904,974
- Strand
- −
Hass · mRNA
PaHa11g11140.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 666
- bp
- 11:36,903,761–36,904,974
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g11140
- eggNOG
- Preferred name: MYB1 | Seed ortholog: 337451.A0A443PNM8 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@3398|UUG-51, Myb_DNA-binding@35493|KPq-43
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009611 response to wounding; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:1901141 regulation of lignin biosynthetic process
- KEGG
- KO: K09422 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g11140.1-protein
derives_frommRNAPaHa11g11140.1
mRNAPaHa11g11140.1
part_ofgenePaHa11g11140
CDS
part_ofPaHa11g11140.1-CDS-11-1787993825:36903761..36904163mRNAPaHa11g11140.1
CDS
part_ofPaHa11g11140.1-CDS-11-1787993825:36904712..36904974mRNAPaHa11g11140.1
exon
part_ofPaHa11g11140.1-exon-11-1787993825:36903761..36904163mRNAPaHa11g11140.1
exon
part_ofPaHa11g11140.1-exon-11-1787993825:36904712..36904974mRNAPaHa11g11140.1
