Feature identity
- Identifier
- PaHa11g11470.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,046 bp
- Genomic location
- 11:37,572,202–37,585,734
- Strand
- +
Hass · mRNA
PaHa11g11470.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,046
- bp
- 11:37,572,202–37,585,734
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g11470
- eggNOG
- Preferred name: AMS | Seed ortholog: 337451.A0A3S3P3A8 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|FXN-30, HLH@33090|AAF-17, HLH@35493|Aps-20, bHLH-MYC_N@131567|A-1*, bHLH-MYC_N@2759|C-2, bHLH-MYC_N@3193|Ad-9, bHLH-MYC_N@33090|s-7
- Gene Ontology
- GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0048653 anther development; GO:0048654 anther morphogenesis; GO:0048657 anther wall tapetum cell differentiation; GO:0048658 anther wall tapetum development
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g11470.1-protein
derives_frommRNAPaHa11g11470.1
mRNAPaHa11g11470.1
part_ofgenePaHa11g11470
CDS
part_ofPaHa11g11470.1-CDS-11-1787993825:37572202..37572312mRNAPaHa11g11470.1
CDS
part_ofPaHa11g11470.1-CDS-11-1787993825:37580279..37580309mRNAPaHa11g11470.1
CDS
part_ofPaHa11g11470.1-CDS-11-1787993825:37580427..37580468mRNAPaHa11g11470.1
CDS
part_ofPaHa11g11470.1-CDS-11-1787993825:37581030..37581159mRNAPaHa11g11470.1
CDS
part_ofPaHa11g11470.1-CDS-11-1787993825:37581242..37581418mRNAPaHa11g11470.1
CDS
part_ofPaHa11g11470.1-CDS-11-1787993825:37582769..37582847mRNAPaHa11g11470.1
CDS
part_ofPaHa11g11470.1-CDS-11-1787993825:37582971..37583039mRNAPaHa11g11470.1
CDS
part_ofPaHa11g11470.1-CDS-11-1787993825:37583322..37584041mRNAPaHa11g11470.1
CDS
part_ofPaHa11g11470.1-CDS-11-1787993825:37584151..37584468mRNAPaHa11g11470.1
CDS
part_ofPaHa11g11470.1-CDS-11-1787993825:37584649..37584825mRNAPaHa11g11470.1
CDS
part_ofPaHa11g11470.1-CDS-11-1787993825:37585033..37585144mRNAPaHa11g11470.1
CDS
part_ofPaHa11g11470.1-CDS-11-1787993825:37585655..37585734mRNAPaHa11g11470.1
exon
part_ofPaHa11g11470.1-exon-11-1787993825:37572202..37572312mRNAPaHa11g11470.1
exon
part_ofPaHa11g11470.1-exon-11-1787993825:37580279..37580309mRNAPaHa11g11470.1
exon
part_ofPaHa11g11470.1-exon-11-1787993825:37580427..37580468mRNAPaHa11g11470.1
exon
part_ofPaHa11g11470.1-exon-11-1787993825:37581030..37581159mRNAPaHa11g11470.1
exon
part_ofPaHa11g11470.1-exon-11-1787993825:37581242..37581418mRNAPaHa11g11470.1
exon
part_ofPaHa11g11470.1-exon-11-1787993825:37582769..37582847mRNAPaHa11g11470.1
exon
part_ofPaHa11g11470.1-exon-11-1787993825:37582971..37583039mRNAPaHa11g11470.1
exon
part_ofPaHa11g11470.1-exon-11-1787993825:37583322..37584041mRNAPaHa11g11470.1
exon
part_ofPaHa11g11470.1-exon-11-1787993825:37584151..37584468mRNAPaHa11g11470.1
exon
part_ofPaHa11g11470.1-exon-11-1787993825:37584649..37584825mRNAPaHa11g11470.1
exon
part_ofPaHa11g11470.1-exon-11-1787993825:37585033..37585144mRNAPaHa11g11470.1
exon
part_ofPaHa11g11470.1-exon-11-1787993825:37585655..37585734mRNAPaHa11g11470.1
