Anise · gene

Chr03.g20312

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

18,359
bp
Chr03:5,518,636–5,536,994
genomic location
Record overview

Feature identity

Identifier
Chr03.g20312
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
18,359 bp
Genomic location
Chr03:5,518,636–5,536,994
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010245992.1,T,[serine threonine-protein kinase]
Gene Ontology
serine threonine-protein kinase | GO:0001101//response to acid chemical; GO:0006355//regulation of transcription, DNA-templated; GO:0006464//cellular protein modification process; GO:0006468//protein phosphorylation; GO:0006793//phosphorus metabolic process; GO:0006796//phosphate-containing compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006935//chemotaxis; GO:0006996//organelle organization; GO:0007154//cell communication; GO:0007163//establishment or maintenance of cell polarity; GO:0007165//signal transduction; GO:0007166//cell surface receptor signaling pathway; GO:0007224//smoothened signaling pathway; GO:0007227//signal transduction downstream of smoothened; GO:0007228//positive regulation of hh target transcription factor activity; GO:0007275//multicellular organism development; GO:0007584//response to nutrient; GO:0008064//regulation of actin polymerization or depolymerization; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008589//regulation of smoothened signaling pathway; GO:0009605//response to external stimulus; GO:0009791//post-embryonic development; GO:0009889//regulation of biosynthetic process; GO:0009966//regulation of signal transduction; GO:0009967//positive regulation of signal transduction; GO:0009987//cellular process; GO:0009991//response to extracellular stimulus; GO:0010033//response to organic substance; GO:0010243//response to organonitrogen compound; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010639//negative regulation of organelle organization; GO:0010646//regulation of cell communication; GO:0010647//positive regulation of cell communication; GO:0014070//response to organic cyclic compound; GO:0016043//cellular component organization; GO:0016310//phosphorylation; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0019538//protein metabolic process; GO:0022607//cellular component assembly; GO:0023051//regulation of signaling; GO:0023052//signaling; GO:0023056//positive regulation of signaling; GO:0030010//establishment of cell polarity; GO:0030030//cell projection organization; GO:0030031//cell projection assembly; GO:0030832//regulation of actin filament length; GO:0030833//regulation of actin filament polymerization; GO:0030837//negative regulation of actin filament polymerization; GO:0031156//regulation of sorocarp development; GO:0031272//regulation of pseudopodium assembly; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031333//negative regulation of protein complex assembly; GO:0031344//regulation of cell projection organization; GO:0031667//response to nutrient levels; GO:0032101//regulation of response to external stimulus; GO:0032104//regulation of response to extracellular stimulus; GO:0032107//regulation of response to nutrient levels; GO:0032271//regulation of protein polymerization; GO:0032272//negative regulation of protein polymerization; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0032535//regulation of cellular component size; GO:0032956//regulation of actin cytoskeleton organization; GO:0032970//regulation of actin filament-based process; GO:0033043//regulation of organelle organization; GO:0033273//response to vitamin; GO:0035556//intracellular signal transduction; GO:0036211//protein modification process; GO:0040011//locomotion; GO:0042221//response to chemical; GO:0042330//taxis; GO:0042493//response to drug; GO:0043170//macromolecule metabolic process; GO:0043254//regulation of protein complex assembly; GO:0043326//chemotaxis to folate; GO:0043327//chemotaxis to cAMP; GO:0043412//macromolecule modification; GO:0043900//regulation of multi-organism process; GO:0044085//cellular component biogenesis; GO:0044087//regulation of cellular component biogenesis; GO:0044093//positive regulation of molecular function; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044260//cellular macromolecule metabolic process; GO:0044267//cellular protein metabolic process; GO:0044782//cilium organization; GO:0045880//positive regulation of smoothened signaling pathway; GO:0048518//positive regulation of biological process; GO:0048519//negative regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0048523//negative regulation of cellular process; GO:0048583//regulation of response to stimulus; GO:0048584//positive regulation of response to stimulus; GO:0048856//anatomical structure development; GO:0050789//regulation of biological process; GO:0050793//regulation of developmental process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051090//regulation of sequence-specific DNA binding transcription factor activity; GO:0051091//positive regulation of sequence-specific DNA binding transcription factor activity; GO:0051128//regulation of cellular component organization; GO:0051129//negative regulation of cellular component organization; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051493//regulation of cytoskeleton organization; GO:0051494//negative regulation of cytoskeleton organization; GO:0051593//response to folic acid; GO:0051716//cellular response to stimulus; GO:0060176//regulation of aggregation involved in sorocarp development; GO:0060255//regulation of macromolecule metabolic process; GO:0060271//cilium assembly; GO:0060491//regulation of cell projection assembly; GO:0065007//biological regulation; GO:0065008//regulation of biological quality; GO:0065009//regulation of molecular function; GO:0070925//organelle assembly; GO:0071704//organic substance metabolic process; GO:0071840//cellular component organization or biogenesis; GO:0080090//regulation of primary metabolic process; GO:0080134//regulation of response to stress; GO:0080135//regulation of cellular response to stress; GO:0090066//regulation of anatomical structure size; GO:1901564//organonitrogen compound metabolic process; GO:1901698//response to nitrogen compound; GO:1901700//response to oxygen-containing compound; GO:1902903//regulation of supramolecular fiber organization; GO:1902904//negative regulation of supramolecular fiber organization; GO:1903506//regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005737//cytoplasm; GO:0005829//cytosol; GO:0005856//cytoskeleton; GO:0005874//microtubule; GO:0005881//cytoplasmic microtubule; GO:0015630//microtubule cytoskeleton; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043228//non-membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043232//intracellular non-membrane-bounded organelle; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044430//cytoskeletal part; GO:0044444//cytoplasmic part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0099080//supramolecular complex; GO:0099081//supramolecular polymer; GO:0099512//supramolecular fiber; GO:0099513//polymeric cytoskeletal fiber | GO:0000166//nucleotide binding; GO:0003674//molecular_function; GO:0003824//catalytic activity; GO:0004672//protein kinase activity; GO:0004674//protein serine/threonine kinase activity; GO:0005488//binding; GO:0005515//protein binding; GO:0005524//ATP binding; GO:0008134//transcription factor binding; GO:0008144//drug binding; GO:0016301//kinase activity; GO:0016740//transferase activity; GO:0016772//transferase activity, transferring phosphorus-containing groups; GO:0016773//phosphotransferase activity, alcohol group as acceptor; GO:0017076//purine nucleotide binding; GO:0030554//adenyl nucleotide binding; GO:0032553//ribonucleotide binding; GO:0032555//purine ribonucleotide binding; GO:0032559//adenyl ribonucleotide binding; GO:0035639//purine ribonucleoside triphosphate binding; GO:0036094//small molecule binding; GO:0043167//ion binding; GO:0043168//anion binding; GO:0097159//organic cyclic compound binding; GO:0097367//carbohydrate derivative binding; GO:1901265//nucleoside phosphate binding; GO:1901363//heterocyclic compound binding
KEGG
K06228 | FU
NR
RWR75451.1 serine/threonine-protein kinase TIO [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q2QAV0.1 RecName: Full=Serine/threonine-protein kinase TIO; AltName: Full=Fused homolog; Short=AtFUSED; AltName: Full=Protein TWO-IN-ONE; Short=AtTIO [Arabidopsis thaliana]
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.