Anise · gene

Chr03.g20243

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

5,514
bp
Chr03:4,823,795–4,829,308
genomic location
Record overview

Feature identity

Identifier
Chr03.g20243
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
5,514 bp
Genomic location
Chr03:4,823,795–4,829,308
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
42345.XP_008790140.1,S,[PPR repeat]
Gene Ontology
PPR repeat | GO:0000079//regulation of cyclin-dependent protein serine/threonine kinase activity; GO:0001932//regulation of protein phosphorylation; GO:0006139//nucleobase-containing compound metabolic process; GO:0006259//DNA metabolic process; GO:0006281//DNA repair; GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006950//response to stress; GO:0006974//cellular response to DNA damage stimulus; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009889//regulation of biosynthetic process; GO:0009987//cellular process; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019220//regulation of phosphate metabolic process; GO:0019222//regulation of metabolic process; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031399//regulation of protein modification process; GO:0032268//regulation of cellular protein metabolic process; GO:0033554//cellular response to stress; GO:0034641//cellular nitrogen compound metabolic process; GO:0042325//regulation of phosphorylation; GO:0043170//macromolecule metabolic process; GO:0043549//regulation of kinase activity; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044260//cellular macromolecule metabolic process; GO:0045859//regulation of protein kinase activity; GO:0046483//heterocycle metabolic process; GO:0050789//regulation of biological process; GO:0050790//regulation of catalytic activity; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051174//regulation of phosphorus metabolic process; GO:0051246//regulation of protein metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051338//regulation of transferase activity; GO:0051716//cellular response to stimulus; GO:0051726//regulation of cell cycle; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0065009//regulation of molecular function; GO:0071704//organic substance metabolic process; GO:0071900//regulation of protein serine/threonine kinase activity; GO:0080090//regulation of primary metabolic process; GO:0090304//nucleic acid metabolic process; GO:1901360//organic cyclic compound metabolic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1904029//regulation of cyclin-dependent protein kinase activity; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0000428//DNA-directed RNA polymerase complex; GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005654//nucleoplasm; GO:0005667//transcription factor complex; GO:0005675//holo TFIIH complex; GO:0016591//DNA-directed RNA polymerase II, holoenzyme; GO:0030880//RNA polymerase complex; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0032806//carboxy-terminal domain protein kinase complex; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044451//nucleoplasm part; GO:0044464//cell part; GO:0044798//nuclear transcription factor complex; GO:0055029//nuclear DNA-directed RNA polymerase complex; GO:0061695//transferase complex, transferring phosphorus-containing groups; GO:0070013//intracellular organelle lumen; GO:0090575//RNA polymerase II transcription factor complex; GO:1902494//catalytic complex; GO:1902554//serine/threonine protein kinase complex; GO:1902911//protein kinase complex; GO:1990234//transferase complex | -
NR
RWR75419.1 pentatricopeptide repeat-containing protein, chloroplastic [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
O65567.2 RecName: Full=Pentatricopeptide repeat-containing protein At4g30825, chloroplastic; Flags: Precursor [Arabidopsis thaliana]
Biological context

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