Feature identity
- Identifier
- PaHa01g32170.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 753 bp
- Genomic location
- 1:81,648,376–81,649,924
- Strand
- +
Hass · mRNA
PaHa01g32170.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 753
- bp
- 1:81,648,376–81,649,924
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g32170
- eggNOG
- Preferred name: DOF3.7 | Seed ortholog: 337451.A0A3S3MIU5 | COG: S | eggNOG OG: zf-Dof@131567|A-1*, zf-Dof@1437183|AGE-21, zf-Dof@3193|Bv-8, zf-Dof@33090|d-5, zf-Dof@3398|GQ-11, zf-Dof@58023|DA-9
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0009416 response to light stimulus; GO:0009639 response to red or far red light; GO:0009845 seed germination; GO:0010030 positive regulation of seed germination; GO:0010161 red light signaling pathway; GO:0010372 positive regulation of gibberellin biosynthetic process; GO:0045892 negative regulation of DNA-templated transcription; GO:0071462 cellular response to water stimulus; GO:0071491 cellular response to red light
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g32170.1-protein
derives_frommRNAPaHa01g32170.1
mRNAPaHa01g32170.1
part_ofgenePaHa01g32170
CDS
part_ofPaHa01g32170.1-CDS-1-1787993825:81648376..81648399mRNAPaHa01g32170.1
CDS
part_ofPaHa01g32170.1-CDS-1-1787993825:81648987..81649658mRNAPaHa01g32170.1
CDS
part_ofPaHa01g32170.1-CDS-1-1787993825:81649729..81649754mRNAPaHa01g32170.1
CDS
part_ofPaHa01g32170.1-CDS-1-1787993825:81649894..81649924mRNAPaHa01g32170.1
exon
part_ofPaHa01g32170.1-exon-1-1787993825:81648376..81648399mRNAPaHa01g32170.1
exon
part_ofPaHa01g32170.1-exon-1-1787993825:81648987..81649658mRNAPaHa01g32170.1
exon
part_ofPaHa01g32170.1-exon-1-1787993825:81649729..81649754mRNAPaHa01g32170.1
exon
part_ofPaHa01g32170.1-exon-1-1787993825:81649894..81649924mRNAPaHa01g32170.1
