Feature identity
- Identifier
- PaHa01g32200.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,751 bp
- Genomic location
- 1:81,700,131–81,707,743
- Strand
- +
Hass · mRNA
PaHa01g32200.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,751
- bp
- 1:81,700,131–81,707,743
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g32200
- eggNOG
- Preferred name: LHW | Seed ortholog: 337451.A0A443NQJ5 | COG: S | eggNOG OG: bHLH-MYC_N@131567|A-1*, bHLH-MYC_N@2759|B-2, bHLH-MYC_N@3193|m-7, bHLH-MYC_N@3398|AU-9
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0007140 male meiotic nuclear division; GO:0009507 chloroplast; GO:0010089 xylem development; GO:0048316 seed development; GO:0048364 root development; GO:0051321 meiotic cell cycle; GO:0071365 cellular response to auxin stimulus; GO:0090058 metaxylem development
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g32200.1-protein
derives_frommRNAPaHa01g32200.1
mRNAPaHa01g32200.1
part_ofgenePaHa01g32200
CDS
part_ofPaHa01g32200.1-CDS-1-1787993825:81700131..81700225mRNAPaHa01g32200.1
CDS
part_ofPaHa01g32200.1-CDS-1-1787993825:81701174..81701263mRNAPaHa01g32200.1
CDS
part_ofPaHa01g32200.1-CDS-1-1787993825:81702653..81702761mRNAPaHa01g32200.1
CDS
part_ofPaHa01g32200.1-CDS-1-1787993825:81703083..81703124mRNAPaHa01g32200.1
CDS
part_ofPaHa01g32200.1-CDS-1-1787993825:81703274..81703333mRNAPaHa01g32200.1
CDS
part_ofPaHa01g32200.1-CDS-1-1787993825:81704306..81706114mRNAPaHa01g32200.1
CDS
part_ofPaHa01g32200.1-CDS-1-1787993825:81706198..81706299mRNAPaHa01g32200.1
CDS
part_ofPaHa01g32200.1-CDS-1-1787993825:81706805..81706948mRNAPaHa01g32200.1
CDS
part_ofPaHa01g32200.1-CDS-1-1787993825:81707096..81707221mRNAPaHa01g32200.1
CDS
part_ofPaHa01g32200.1-CDS-1-1787993825:81707570..81707743mRNAPaHa01g32200.1
exon
part_ofPaHa01g32200.1-exon-1-1787993825:81700131..81700225mRNAPaHa01g32200.1
exon
part_ofPaHa01g32200.1-exon-1-1787993825:81701174..81701263mRNAPaHa01g32200.1
exon
part_ofPaHa01g32200.1-exon-1-1787993825:81702653..81702761mRNAPaHa01g32200.1
exon
part_ofPaHa01g32200.1-exon-1-1787993825:81703083..81703124mRNAPaHa01g32200.1
exon
part_ofPaHa01g32200.1-exon-1-1787993825:81703274..81703333mRNAPaHa01g32200.1
exon
part_ofPaHa01g32200.1-exon-1-1787993825:81704306..81706114mRNAPaHa01g32200.1
exon
part_ofPaHa01g32200.1-exon-1-1787993825:81706198..81706299mRNAPaHa01g32200.1
exon
part_ofPaHa01g32200.1-exon-1-1787993825:81706805..81706948mRNAPaHa01g32200.1
exon
part_ofPaHa01g32200.1-exon-1-1787993825:81707096..81707221mRNAPaHa01g32200.1
exon
part_ofPaHa01g32200.1-exon-1-1787993825:81707570..81707743mRNAPaHa01g32200.1
