Feature identity
- Identifier
- PaHa11g18420.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 603 bp
- Genomic location
- 11:49,219,130–49,219,732
- Strand
- −
Hass · mRNA
PaHa11g18420.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 603
- bp
- 11:49,219,130–49,219,732
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa11g18420
- eggNOG
- Preferred name: LOC104606778 | Seed ortholog: 337451.A0A3S3ND69 | COG: COG2036 | eggNOG OG: CBFD_NFYB_HMF@131567|BS-10, CBFD_NFYB_HMF@2759|GM-15
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009408 response to heat; GO:0009414 response to water deprivation
- KEGG
- EC: ec:6.5.1.3 | KO: K08065 | Pathway: 04612, 05152, 05166 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa11g18420.1-protein
derives_frommRNAPaHa11g18420.1
mRNAPaHa11g18420.1
part_ofgenePaHa11g18420
CDS
part_ofPaHa11g18420.1-CDS-11-1787993825:49219130..49219732mRNAPaHa11g18420.1
exon
part_ofPaHa11g18420.1-exon-11-1787993825:49219130..49219732mRNAPaHa11g18420.1
