Anise · gene

Chr12.g78375

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

15,848
bp
Chr12:716,413–732,260
genomic location
Record overview

Feature identity

Identifier
Chr12.g78375
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
15,848 bp
Genomic location
Chr12:716,413–732,260
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
218851.Aquca_072_00144.1,I,[Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids]
Gene Ontology
Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids | GO:0006066//alcohol metabolic process; GO:0006084//acetyl-CoA metabolic process; GO:0006139//nucleobase-containing compound metabolic process; GO:0006163//purine nucleotide metabolic process; GO:0006464//cellular protein modification process; GO:0006486//protein glycosylation; GO:0006487//protein N-linked glycosylation; GO:0006488//dolichol-linked oligosaccharide biosynthetic process; GO:0006489//dolichyl diphosphate biosynthetic process; GO:0006490//oligosaccharide-lipid intermediate biosynthetic process; GO:0006629//lipid metabolic process; GO:0006637//acyl-CoA metabolic process; GO:0006644//phospholipid metabolic process; GO:0006694//steroid biosynthetic process; GO:0006695//cholesterol biosynthetic process; GO:0006720//isoprenoid metabolic process; GO:0006725//cellular aromatic compound metabolic process; GO:0006732//coenzyme metabolic process; GO:0006753//nucleoside phosphate metabolic process; GO:0006790//sulfur compound metabolic process; GO:0006793//phosphorus metabolic process; GO:0006796//phosphate-containing compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008202//steroid metabolic process; GO:0008203//cholesterol metabolic process; GO:0008284//positive regulation of cell proliferation; GO:0008299//isoprenoid biosynthetic process; GO:0008610//lipid biosynthetic process; GO:0008654//phospholipid biosynthetic process; GO:0009058//biosynthetic process; GO:0009059//macromolecule biosynthetic process; GO:0009100//glycoprotein metabolic process; GO:0009101//glycoprotein biosynthetic process; GO:0009117//nucleotide metabolic process; GO:0009150//purine ribonucleotide metabolic process; GO:0009240//isopentenyl diphosphate biosynthetic process; GO:0009259//ribonucleotide metabolic process; GO:0009889//regulation of biosynthetic process; GO:0009987//cellular process; GO:0016125//sterol metabolic process; GO:0016126//sterol biosynthetic process; GO:0019216//regulation of lipid metabolic process; GO:0019218//regulation of steroid metabolic process; GO:0019222//regulation of metabolic process; GO:0019287//isopentenyl diphosphate biosynthetic process, mevalonate pathway; GO:0019538//protein metabolic process; GO:0019637//organophosphate metabolic process; GO:0019693//ribose phosphate metabolic process; GO:0033865//nucleoside bisphosphate metabolic process; GO:0033875//ribonucleoside bisphosphate metabolic process; GO:0034032//purine nucleoside bisphosphate metabolic process; GO:0034641//cellular nitrogen compound metabolic process; GO:0034645//cellular macromolecule biosynthetic process; GO:0035383//thioester metabolic process; GO:0036211//protein modification process; GO:0042127//regulation of cell proliferation; GO:0043170//macromolecule metabolic process; GO:0043412//macromolecule modification; GO:0043413//macromolecule glycosylation; GO:0043603//cellular amide metabolic process; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044249//cellular biosynthetic process; GO:0044255//cellular lipid metabolic process; GO:0044260//cellular macromolecule metabolic process; GO:0044267//cellular protein metabolic process; GO:0044281//small molecule metabolic process; GO:0044283//small molecule biosynthetic process; GO:0045540//regulation of cholesterol biosynthetic process; GO:0046165//alcohol biosynthetic process; GO:0046465//dolichyl diphosphate metabolic process; GO:0046483//heterocycle metabolic process; GO:0046490//isopentenyl diphosphate metabolic process; GO:0046890//regulation of lipid biosynthetic process; GO:0048518//positive regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050810//regulation of steroid biosynthetic process; GO:0051186//cofactor metabolic process; GO:0055086//nucleobase-containing small molecule metabolic process; GO:0065007//biological regulation; GO:0070085//glycosylation; GO:0071704//organic substance metabolic process; GO:0072521//purine-containing compound metabolic process; GO:0080090//regulation of primary metabolic process; GO:0090181//regulation of cholesterol metabolic process; GO:0090407//organophosphate biosynthetic process; GO:1901135//carbohydrate derivative metabolic process; GO:1901137//carbohydrate derivative biosynthetic process; GO:1901360//organic cyclic compound metabolic process; GO:1901362//organic cyclic compound biosynthetic process; GO:1901564//organonitrogen compound metabolic process; GO:1901566//organonitrogen compound biosynthetic process; GO:1901576//organic substance biosynthetic process; GO:1901615//organic hydroxy compound metabolic process; GO:1901617//organic hydroxy compound biosynthetic process; GO:1902652//secondary alcohol metabolic process; GO:1902653//secondary alcohol biosynthetic process; GO:1902930//regulation of alcohol biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005737//cytoplasm; GO:0005777//peroxisome; GO:0005829//cytosol; GO:0042579//microbody; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044444//cytoplasmic part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003824//catalytic activity; GO:0004163//diphosphomevalonate decarboxylase activity; GO:0005488//binding; GO:0005515//protein binding; GO:0016829//lyase activity; GO:0016830//carbon-carbon lyase activity; GO:0016831//carboxy-lyase activity; GO:0030544//Hsp70 protein binding; GO:0031072//heat shock protein binding; GO:0042802//identical protein binding; GO:0042803//protein homodimerization activity; GO:0046983//protein dimerization activity
KEGG
K01597 | MVD, mvaD
NR
RWR97142.1 mevalonate 5-diphosphate decarboxylase [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
F4JCU3.1 RecName: Full=Diphosphomevalonate decarboxylase MVD2, peroxisomal; AltName: Full=Mevalonate 5-diphosphate decarboxylase 2; Short=AtMDD2; Short=AtMVD2 [Arabidopsis thaliana]
Biological context

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