Anise · gene

Chr09.g64306

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

61,015
bp
Chr09:9,879,043–9,940,057
genomic location
Record overview

Feature identity

Identifier
Chr09.g64306
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
61,015 bp
Genomic location
Chr09:9,879,043–9,940,057
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010257988.1,A,[Cleavage stimulation factor subunit]
Gene Ontology
Cleavage stimulation factor subunit | GO:0000375//RNA splicing, via transesterification reactions; GO:0000377//RNA splicing, via transesterification reactions with bulged adenosine as nucleophile; GO:0000398//mRNA splicing, via spliceosome; GO:0006139//nucleobase-containing compound metabolic process; GO:0006351//transcription, DNA-templated; GO:0006353//DNA-templated transcription, termination; GO:0006366//transcription from RNA polymerase II promoter; GO:0006369//termination of RNA polymerase II transcription; GO:0006396//RNA processing; GO:0006397//mRNA processing; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008380//RNA splicing; GO:0009058//biosynthetic process; GO:0009059//macromolecule biosynthetic process; GO:0009987//cellular process; GO:0010467//gene expression; GO:0016070//RNA metabolic process; GO:0016071//mRNA metabolic process; GO:0018130//heterocycle biosynthetic process; GO:0019438//aromatic compound biosynthetic process; GO:0031123//RNA 3'-end processing; GO:0031124//mRNA 3'-end processing; GO:0032774//RNA biosynthetic process; GO:0034641//cellular nitrogen compound metabolic process; GO:0034645//cellular macromolecule biosynthetic process; GO:0034654//nucleobase-containing compound biosynthetic process; GO:0043170//macromolecule metabolic process; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044249//cellular biosynthetic process; GO:0044260//cellular macromolecule metabolic process; GO:0044271//cellular nitrogen compound biosynthetic process; GO:0046483//heterocycle metabolic process; GO:0071704//organic substance metabolic process; GO:0090304//nucleic acid metabolic process; GO:0097659//nucleic acid-templated transcription; GO:1901360//organic cyclic compound metabolic process; GO:1901362//organic cyclic compound biosynthetic process; GO:1901576//organic substance biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005654//nucleoplasm; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0070013//intracellular organelle lumen | -
KEGG
K14406 | CSTF1
NR
RWR94823.1 cleavage stimulation factor subunit 50 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q8L4J2.1 RecName: Full=Cleavage stimulation factor subunit 50; Short=AtCstF-50; Short=AtCstF50; AltName: Full=CF-1 50 kDa subunit; AltName: Full=Cleavage stimulation factor 50 kDa subunit; Short=CSTF 50 kDa subunit [Arabidopsis thaliana]
Biological context

Connected feature records

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