Anise · gene

Chr08.g62681

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

3,152
bp
Chr08:54,182,559–54,185,710
genomic location
Record overview

Feature identity

Identifier
Chr08.g62681
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
3,152 bp
Genomic location
Chr08:54,182,559–54,185,710
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
29760.VIT_00s0204g00170.t01,S,[Lil3 protein]
Gene Ontology
Lil3 protein | GO:0006355//regulation of transcription, DNA-templated; GO:0006810//transport; GO:0008150//biological_process; GO:0009889//regulation of biosynthetic process; GO:0009891//positive regulation of biosynthetic process; GO:0009893//positive regulation of metabolic process; GO:0010380//regulation of chlorophyll biosynthetic process; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0019216//regulation of lipid metabolic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0019747//regulation of isoprenoid metabolic process; GO:0030656//regulation of vitamin metabolic process; GO:0031323//regulation of cellular metabolic process; GO:0031325//positive regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031328//positive regulation of cellular biosynthetic process; GO:0045828//positive regulation of isoprenoid metabolic process; GO:0045834//positive regulation of lipid metabolic process; GO:0046136//positive regulation of vitamin metabolic process; GO:0046889//positive regulation of lipid biosynthetic process; GO:0046890//regulation of lipid biosynthetic process; GO:0048518//positive regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051173//positive regulation of nitrogen compound metabolic process; GO:0051179//localization; GO:0051193//regulation of cofactor metabolic process; GO:0051194//positive regulation of cofactor metabolic process; GO:0051234//establishment of localization; GO:0051252//regulation of RNA metabolic process; GO:0055085//transmembrane transport; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0080090//regulation of primary metabolic process; GO:0090056//regulation of chlorophyll metabolic process; GO:1901401//regulation of tetrapyrrole metabolic process; GO:1901403//positive regulation of tetrapyrrole metabolic process; GO:1901463//regulation of tetrapyrrole biosynthetic process; GO:1901465//positive regulation of tetrapyrrole biosynthetic process; GO:1902326//positive regulation of chlorophyll biosynthetic process; GO:1902930//regulation of alcohol biosynthetic process; GO:1902932//positive regulation of alcohol biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1904963//regulation of phytol biosynthetic process; GO:1904964//positive regulation of phytol biosynthetic process; GO:1904965//regulation of vitamin E biosynthetic process; GO:1904966//positive regulation of vitamin E biosynthetic process; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005737//cytoplasm; GO:0009507//chloroplast; GO:0009534//chloroplast thylakoid; GO:0009535//chloroplast thylakoid membrane; GO:0009536//plastid; GO:0009579//thylakoid; GO:0016020//membrane; GO:0031976//plastid thylakoid; GO:0031984//organelle subcompartment; GO:0034357//photosynthetic membrane; GO:0042651//thylakoid membrane; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044434//chloroplast part; GO:0044435//plastid part; GO:0044436//thylakoid part; GO:0044444//cytoplasmic part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0055035//plastid thylakoid membrane | GO:0003674//molecular_function; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0005515//protein binding; GO:0019899//enzyme binding; GO:0042802//identical protein binding; GO:0043495//protein anchor
NR
RWR86773.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9SYX1.1 RecName: Full=Light-harvesting complex-like protein 3 isotype 1, chloroplastic; AltName: Full=LHC-like protein 3 isoform 1; Flags: Precursor [Arabidopsis thaliana]
Biological context

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