Anise · gene

Chr08.g62600

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

9,405
bp
Chr08:52,707,721–52,717,125
genomic location
Record overview

Feature identity

Identifier
Chr08.g62600
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
9,405 bp
Genomic location
Chr08:52,707,721–52,717,125
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
42345.XP_008798810.1,O,[E3 ubiquitin-protein ligase]
Gene Ontology
E3 ubiquitin-protein ligase | GO:0006355//regulation of transcription, DNA-templated; GO:0006464//cellular protein modification process; GO:0006807//nitrogen compound metabolic process; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009889//regulation of biosynthetic process; GO:0009987//cellular process; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0016567//protein ubiquitination; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0019538//protein metabolic process; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0032446//protein modification by small protein conjugation; GO:0036211//protein modification process; GO:0043170//macromolecule metabolic process; GO:0043412//macromolecule modification; GO:0044093//positive regulation of molecular function; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044260//cellular macromolecule metabolic process; GO:0044267//cellular protein metabolic process; GO:0048518//positive regulation of biological process; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0051090//regulation of sequence-specific DNA binding transcription factor activity; GO:0051091//positive regulation of sequence-specific DNA binding transcription factor activity; GO:0051092//positive regulation of NF-kappaB transcription factor activity; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0065009//regulation of molecular function; GO:0070647//protein modification by small protein conjugation or removal; GO:0071704//organic substance metabolic process; GO:0080090//regulation of primary metabolic process; GO:1901564//organonitrogen compound metabolic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005737//cytoplasm; GO:0005829//cytosol; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044444//cytoplasmic part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003824//catalytic activity; GO:0004842//ubiquitin-protein transferase activity; GO:0005488//binding; GO:0005515//protein binding; GO:0008134//transcription factor binding; GO:0016740//transferase activity; GO:0019787//ubiquitin-like protein transferase activity; GO:0051059//NF-kappaB binding; GO:0061630//ubiquitin protein ligase activity; GO:0061659//ubiquitin-like protein ligase activity
KEGG
K10640 | RNF25, AO7
NR
RWR86721.1 zinc finger protein [Cinnamomum micranthum f. kanehirae]
Biological context

Connected feature records

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