Anise · gene

Chr07.g56860

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

6,527
bp
Chr07:71,626,633–71,633,159
genomic location
Record overview

Feature identity

Identifier
Chr07.g56860
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
6,527 bp
Genomic location
Chr07:71,626,633–71,633,159
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
29760.VIT_12s0028g01110.t01,K,[transcription factor]
Gene Ontology
transcription factor | GO:0006355//regulation of transcription, DNA-templated; GO:0007154//cell communication; GO:0007165//signal transduction; GO:0007275//multicellular organism development; GO:0007602//phototransduction; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009058//biosynthetic process; GO:0009314//response to radiation; GO:0009416//response to light stimulus; GO:0009581//detection of external stimulus; GO:0009582//detection of abiotic stimulus; GO:0009583//detection of light stimulus; GO:0009585//red, far-red light phototransduction; GO:0009605//response to external stimulus; GO:0009628//response to abiotic stimulus; GO:0009637//response to blue light; GO:0009639//response to red or far red light; GO:0009640//photomorphogenesis; GO:0009642//response to light intensity; GO:0009645//response to low light intensity stimulus; GO:0009692//ethylene metabolic process; GO:0009693//ethylene biosynthetic process; GO:0009704//de-etiolation; GO:0009791//post-embryonic development; GO:0009889//regulation of biosynthetic process; GO:0009966//regulation of signal transduction; GO:0009987//cellular process; GO:0010017//red or far-red light signaling pathway; GO:0010114//response to red light; GO:0010161//red light signaling pathway; GO:0010244//response to low fluence blue light stimulus by blue low-fluence system; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010600//regulation of auxin biosynthetic process; GO:0010646//regulation of cell communication; GO:0010817//regulation of hormone levels; GO:0010928//regulation of auxin mediated signaling pathway; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0023051//regulation of signaling; GO:0023052//signaling; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0032350//regulation of hormone metabolic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0042445//hormone metabolic process; GO:0042446//hormone biosynthetic process; GO:0043449//cellular alkene metabolic process; GO:0043450//alkene biosynthetic process; GO:0044237//cellular metabolic process; GO:0044249//cellular biosynthetic process; GO:0046885//regulation of hormone biosynthetic process; GO:0048583//regulation of response to stimulus; GO:0048856//anatomical structure development; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051606//detection of stimulus; GO:0051716//cellular response to stimulus; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0065008//regulation of biological quality; GO:0071214//cellular response to abiotic stimulus; GO:0071478//cellular response to radiation; GO:0071482//cellular response to light stimulus; GO:0071489//cellular response to red or far red light; GO:0071491//cellular response to red light; GO:0071704//organic substance metabolic process; GO:0080090//regulation of primary metabolic process; GO:0090354//regulation of auxin metabolic process; GO:1900673//olefin metabolic process; GO:1900674//olefin biosynthetic process; GO:1901576//organic substance biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
KEGG
K16189 | PIF4
NR
RWR85794.1 transcription factor PIF4-like protein isoform X1 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q10CH5.1 RecName: Full=Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13; Short=OsPIL13; Short=PIF-like protein 13; AltName: Full=Basic helix-loop-helix protein 152; Short=OsbHLH152; AltName: Full=OsPIL1 [Oryza sativa Japonica Group]
Biological context

Connected feature records

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