Feature identity
- Identifier
- PaHa12g03520.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 5,529 bp
- Genomic location
- 12:15,964,265–16,116,573
- Strand
- +
Hass · mRNA
PaHa12g03520.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 5,529
- bp
- 12:15,964,265–16,116,573
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g03520
- eggNOG
- Preferred name: LOC100819576 | Seed ortholog: 4432.A0A1U8A1C0 | COG: S | eggNOG OG: ARID@131567|A-1*, ARID@2759|CS-9, JmjC@131567|Ae-7, JmjC@2759|Xi-17, JmjN@131567|A-1*, JmjN@2759|Bi-10, PHD@131567|A-1*, PHD@2759|Vu-13, PLU-1@131567|A-1, zf-C5HC2@131567|A-1*, zf-C5HC2@2759|C-2!
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0009737 response to abscisic acid; GO:0009738 abscisic acid-activated signaling pathway; GO:0031490 chromatin DNA binding; GO:0032453 histone H3K4 demethylase activity; GO:0034647 histone H3K4me/H3K4me2/H3K4me3 demethylase activity; GO:0043565 sequence-specific DNA binding; GO:0045814 negative regulation of gene expression, epigenetic; GO:0048589 developmental growth; GO:0090333 regulation of stomatal closure; GO:0099402 plant organ development
- KEGG
- EC: ec:1.14.11.67 | KO: K11446 | Pathway: 03022, 03082, 03083, 04550 | BRITE: 00001, 01000, 01009, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g03520.1-protein
derives_frommRNAPaHa12g03520.1
mRNAPaHa12g03520.1
part_ofgenePaHa12g03520
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:15964265..15965649mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:15976304..15976361mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:15989753..15989875mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:15990212..15990269mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:15990394..15990530mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16012852..16013010mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16013099..16013185mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16023137..16023331mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16037675..16037827mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16038068..16038259mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16038363..16038434mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16038764..16038859mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16045616..16045702mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16045885..16046001mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16046112..16046319mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16046452..16046516mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16046829..16046887mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16046993..16047124mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16047241..16047400mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16047477..16047559mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16047635..16047800mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16056151..16056333mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16056535..16056596mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16066693..16066771mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16081136..16081285mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16081385..16081515mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16095842..16095962mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16096043..16096116mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16106459..16106606mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16109066..16109215mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16114340..16114435mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16115034..16115129mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16115206..16115414mRNAPaHa12g03520.1
CDS
part_ofPaHa12g03520.1-CDS-12-1787993825:16116336..16116573mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:15964265..15965649mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:15976304..15976361mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:15989753..15989875mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:15990212..15990269mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:15990394..15990530mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16012852..16013010mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16013099..16013185mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16023137..16023331mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16037675..16037827mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16038068..16038259mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16038363..16038434mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16038764..16038859mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16045616..16045702mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16045885..16046001mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16046112..16046319mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16046452..16046516mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16046829..16046887mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16046993..16047124mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16047241..16047400mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16047477..16047559mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16047635..16047800mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16056151..16056333mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16056535..16056596mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16066693..16066771mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16081136..16081285mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16081385..16081515mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16095842..16095962mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16096043..16096116mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16106459..16106606mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16109066..16109215mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16114340..16114435mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16115034..16115129mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16115206..16115414mRNAPaHa12g03520.1
exon
part_ofPaHa12g03520.1-exon-12-1787993825:16116336..16116573mRNAPaHa12g03520.1
