Feature identity
- Identifier
- PaHa12g04580.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 3,237 bp
- Genomic location
- 12:22,615,380–22,633,432
- Strand
- +
Hass · mRNA
PaHa12g04580.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,237
- bp
- 12:22,615,380–22,633,432
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g04580
- eggNOG
- Preferred name: LHW | Seed ortholog: 337451.A0A3S3NR84 | COG: S | eggNOG OG: bHLH-MYC_N@131567|A-1*, bHLH-MYC_N@2759|B-2, bHLH-MYC_N@3193|m-7, bHLH-MYC_N@3398|AT-9
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0010078 maintenance of root meristem identity; GO:0010089 xylem development; GO:0010479 stele development; GO:0042803 protein homodimerization activity; GO:0045893 positive regulation of DNA-templated transcription; GO:0048364 root development
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g04580.1-protein
derives_frommRNAPaHa12g04580.1
mRNAPaHa12g04580.1
part_ofgenePaHa12g04580
CDS
part_ofPaHa12g04580.1-CDS-12-1787993825:22615380..22615485mRNAPaHa12g04580.1
CDS
part_ofPaHa12g04580.1-CDS-12-1787993825:22616729..22616954mRNAPaHa12g04580.1
CDS
part_ofPaHa12g04580.1-CDS-12-1787993825:22617036..22617143mRNAPaHa12g04580.1
CDS
part_ofPaHa12g04580.1-CDS-12-1787993825:22618099..22618317mRNAPaHa12g04580.1
CDS
part_ofPaHa12g04580.1-CDS-12-1787993825:22618502..22618583mRNAPaHa12g04580.1
CDS
part_ofPaHa12g04580.1-CDS-12-1787993825:22622284..22622370mRNAPaHa12g04580.1
CDS
part_ofPaHa12g04580.1-CDS-12-1787993825:22625118..22626980mRNAPaHa12g04580.1
CDS
part_ofPaHa12g04580.1-CDS-12-1787993825:22627111..22627212mRNAPaHa12g04580.1
CDS
part_ofPaHa12g04580.1-CDS-12-1787993825:22632366..22632506mRNAPaHa12g04580.1
CDS
part_ofPaHa12g04580.1-CDS-12-1787993825:22632592..22632717mRNAPaHa12g04580.1
CDS
part_ofPaHa12g04580.1-CDS-12-1787993825:22633256..22633432mRNAPaHa12g04580.1
exon
part_ofPaHa12g04580.1-exon-12-1787993825:22615380..22615485mRNAPaHa12g04580.1
exon
part_ofPaHa12g04580.1-exon-12-1787993825:22616729..22616954mRNAPaHa12g04580.1
exon
part_ofPaHa12g04580.1-exon-12-1787993825:22617036..22617143mRNAPaHa12g04580.1
exon
part_ofPaHa12g04580.1-exon-12-1787993825:22618099..22618317mRNAPaHa12g04580.1
exon
part_ofPaHa12g04580.1-exon-12-1787993825:22618502..22618583mRNAPaHa12g04580.1
exon
part_ofPaHa12g04580.1-exon-12-1787993825:22622284..22622370mRNAPaHa12g04580.1
exon
part_ofPaHa12g04580.1-exon-12-1787993825:22625118..22626980mRNAPaHa12g04580.1
exon
part_ofPaHa12g04580.1-exon-12-1787993825:22627111..22627212mRNAPaHa12g04580.1
exon
part_ofPaHa12g04580.1-exon-12-1787993825:22632366..22632506mRNAPaHa12g04580.1
exon
part_ofPaHa12g04580.1-exon-12-1787993825:22632592..22632717mRNAPaHa12g04580.1
exon
part_ofPaHa12g04580.1-exon-12-1787993825:22633256..22633432mRNAPaHa12g04580.1
