Feature identity
- Identifier
- PaHa12g05830.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 309 bp
- Genomic location
- 12:26,448,166–26,448,474
- Strand
- −
Hass · mRNA
PaHa12g05830.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 309
- bp
- 12:26,448,166–26,448,474
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g05830
- eggNOG
- Preferred name: SCR | Seed ortholog: 1194695.A0A5A7SM38 | COG: S | eggNOG OG: GRAS@131567|n-8, GRAS@3193|NC-17, GRAS@3398|WW-19
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008356 asymmetric cell division; GO:0009630 gravitropism; GO:0009956 radial pattern formation; GO:0043565 sequence-specific DNA binding; GO:0045454 cell redox homeostasis; GO:0048364 root development; GO:0048366 leaf development; GO:0051457 maintenance of protein location in nucleus; GO:0090610 bundle sheath cell fate specification
- KEGG
- KO: K27742 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g05830.1-protein
derives_frommRNAPaHa12g05830.1
mRNAPaHa12g05830.1
part_ofgenePaHa12g05830
CDS
part_ofPaHa12g05830.1-CDS-12-1787993825:26448166..26448474mRNAPaHa12g05830.1
exon
part_ofPaHa12g05830.1-exon-12-1787993825:26448166..26448474mRNAPaHa12g05830.1
