Feature identity
- Identifier
- PaHa12g06460.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,071 bp
- Genomic location
- 12:27,823,680–27,859,823
- Strand
- +
Hass · mRNA
PaHa12g06460.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,071
- bp
- 12:27,823,680–27,859,823
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g06460
- eggNOG
- Preferred name: GT-1 | Seed ortholog: 337451.A0A3S3R8H3 | COG: S | eggNOG OG: Myb_DNA-bind_4@131221|Cu-10, Myb_DNA-bind_4@131567|c-5, Myb_DNA-bind_4@2759|As-8
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0042802 identical protein binding; GO:0043565 sequence-specific DNA binding
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g06460.1-protein
derives_frommRNAPaHa12g06460.1
mRNAPaHa12g06460.1
part_ofgenePaHa12g06460
CDS
part_ofPaHa12g06460.1-CDS-12-1787993825:27823680..27824079mRNAPaHa12g06460.1
CDS
part_ofPaHa12g06460.1-CDS-12-1787993825:27824433..27824471mRNAPaHa12g06460.1
CDS
part_ofPaHa12g06460.1-CDS-12-1787993825:27838463..27838594mRNAPaHa12g06460.1
CDS
part_ofPaHa12g06460.1-CDS-12-1787993825:27859239..27859466mRNAPaHa12g06460.1
CDS
part_ofPaHa12g06460.1-CDS-12-1787993825:27859552..27859823mRNAPaHa12g06460.1
exon
part_ofPaHa12g06460.1-exon-12-1787993825:27823680..27824079mRNAPaHa12g06460.1
exon
part_ofPaHa12g06460.1-exon-12-1787993825:27824433..27824471mRNAPaHa12g06460.1
exon
part_ofPaHa12g06460.1-exon-12-1787993825:27838463..27838594mRNAPaHa12g06460.1
exon
part_ofPaHa12g06460.1-exon-12-1787993825:27859239..27859466mRNAPaHa12g06460.1
exon
part_ofPaHa12g06460.1-exon-12-1787993825:27859552..27859823mRNAPaHa12g06460.1
