Feature identity
- Identifier
- PaHa01g33620.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 897 bp
- Genomic location
- 1:83,726,086–83,732,453
- Strand
- +
Hass · mRNA
PaHa01g33620.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 897
- bp
- 1:83,726,086–83,732,453
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g33620
- eggNOG
- Preferred name: ASG4 | Seed ortholog: 337451.A0A3S5WGQ2 | COG: S | eggNOG OG: Myb_DNA-binding@131567|uI-23, Myb_DNA-binding@2759|yY-24, Myb_DNA-binding@33090|INd-41, Myb_DNA-binding@3398|PWh-47
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0007623 circadian rhythm; GO:0009637 response to blue light; GO:0010099 regulation of photomorphogenesis; GO:0010114 response to red light; GO:0032922 circadian regulation of gene expression; GO:0042752 regulation of circadian rhythm; GO:0043153 entrainment of circadian clock by photoperiod; GO:2000024 regulation of leaf development; GO:2000028 regulation of photoperiodism, flowering
- KEGG
- EC: ec:3.4.21.102 | KO: K03797, K11314, K12133, K12134, K15127 | Pathway: 04712 | BRITE: 00001, 01000, 01002, 03000, 03021, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g33620.1-protein
derives_frommRNAPaHa01g33620.1
mRNAPaHa01g33620.1
part_ofgenePaHa01g33620
CDS
part_ofPaHa01g33620.1-CDS-1-1787993825:83726086..83726213mRNAPaHa01g33620.1
CDS
part_ofPaHa01g33620.1-CDS-1-1787993825:83727393..83727450mRNAPaHa01g33620.1
CDS
part_ofPaHa01g33620.1-CDS-1-1787993825:83728031..83728154mRNAPaHa01g33620.1
CDS
part_ofPaHa01g33620.1-CDS-1-1787993825:83728230..83728406mRNAPaHa01g33620.1
CDS
part_ofPaHa01g33620.1-CDS-1-1787993825:83728498..83728626mRNAPaHa01g33620.1
CDS
part_ofPaHa01g33620.1-CDS-1-1787993825:83729311..83729420mRNAPaHa01g33620.1
CDS
part_ofPaHa01g33620.1-CDS-1-1787993825:83730269..83730328mRNAPaHa01g33620.1
CDS
part_ofPaHa01g33620.1-CDS-1-1787993825:83732257..83732360mRNAPaHa01g33620.1
CDS
part_ofPaHa01g33620.1-CDS-1-1787993825:83732447..83732453mRNAPaHa01g33620.1
exon
part_ofPaHa01g33620.1-exon-1-1787993825:83726086..83726213mRNAPaHa01g33620.1
exon
part_ofPaHa01g33620.1-exon-1-1787993825:83727393..83727450mRNAPaHa01g33620.1
exon
part_ofPaHa01g33620.1-exon-1-1787993825:83728031..83728154mRNAPaHa01g33620.1
exon
part_ofPaHa01g33620.1-exon-1-1787993825:83728230..83728406mRNAPaHa01g33620.1
exon
part_ofPaHa01g33620.1-exon-1-1787993825:83728498..83728626mRNAPaHa01g33620.1
exon
part_ofPaHa01g33620.1-exon-1-1787993825:83729311..83729420mRNAPaHa01g33620.1
exon
part_ofPaHa01g33620.1-exon-1-1787993825:83730269..83730328mRNAPaHa01g33620.1
exon
part_ofPaHa01g33620.1-exon-1-1787993825:83732257..83732360mRNAPaHa01g33620.1
exon
part_ofPaHa01g33620.1-exon-1-1787993825:83732447..83732453mRNAPaHa01g33620.1
