Anise · gene

Chr03.g28683

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

9,298
bp
Chr03:88,302,154–88,311,451
genomic location
Record overview

Feature identity

Identifier
Chr03.g28683
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
9,298 bp
Genomic location
Chr03:88,302,154–88,311,451
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010279421.1,T,[belongs to the protein kinase superfamily]
Gene Ontology
belongs to the protein kinase superfamily | GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006464//cellular protein modification process; GO:0006468//protein phosphorylation; GO:0006793//phosphorus metabolic process; GO:0006796//phosphate-containing compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009889//regulation of biosynthetic process; GO:0009891//positive regulation of biosynthetic process; GO:0009893//positive regulation of metabolic process; GO:0009987//cellular process; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010557//positive regulation of macromolecule biosynthetic process; GO:0010604//positive regulation of macromolecule metabolic process; GO:0010628//positive regulation of gene expression; GO:0016310//phosphorylation; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0019538//protein metabolic process; GO:0031323//regulation of cellular metabolic process; GO:0031325//positive regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031328//positive regulation of cellular biosynthetic process; GO:0036211//protein modification process; GO:0043170//macromolecule metabolic process; GO:0043412//macromolecule modification; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044260//cellular macromolecule metabolic process; GO:0044267//cellular protein metabolic process; GO:0045893//positive regulation of transcription, DNA-templated; GO:0045935//positive regulation of nucleobase-containing compound metabolic process; GO:0045944//positive regulation of transcription from RNA polymerase II promoter; GO:0048518//positive regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051173//positive regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051254//positive regulation of RNA metabolic process; GO:0051726//regulation of cell cycle; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0071704//organic substance metabolic process; GO:0080090//regulation of primary metabolic process; GO:1901564//organonitrogen compound metabolic process; GO:1902680//positive regulation of RNA biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903508//positive regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0000428//DNA-directed RNA polymerase complex; GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005654//nucleoplasm; GO:0005667//transcription factor complex; GO:0005675//holo TFIIH complex; GO:0005737//cytoplasm; GO:0016591//DNA-directed RNA polymerase II, holoenzyme; GO:0030880//RNA polymerase complex; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0032806//carboxy-terminal domain protein kinase complex; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044451//nucleoplasm part; GO:0044464//cell part; GO:0044798//nuclear transcription factor complex; GO:0055029//nuclear DNA-directed RNA polymerase complex; GO:0061695//transferase complex, transferring phosphorus-containing groups; GO:0070013//intracellular organelle lumen; GO:0070985//TFIIK complex; GO:0090575//RNA polymerase II transcription factor complex; GO:1902494//catalytic complex; GO:1902554//serine/threonine protein kinase complex; GO:1902911//protein kinase complex; GO:1990234//transferase complex | GO:0003674//molecular_function; GO:0003824//catalytic activity; GO:0004672//protein kinase activity; GO:0004674//protein serine/threonine kinase activity; GO:0004693//cyclin-dependent protein serine/threonine kinase activity; GO:0016301//kinase activity; GO:0016740//transferase activity; GO:0016772//transferase activity, transferring phosphorus-containing groups; GO:0016773//phosphotransferase activity, alcohol group as acceptor; GO:0097472//cyclin-dependent protein kinase activity
KEGG
K02202 | CDK7
NR
RWR77987.1 cyclin-dependent kinase D-1-like protein isoform X1 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
P29620.1 RecName: Full=Cyclin-dependent kinase D-1; Short=CDKD;1; AltName: Full=CDC2+/CDC28-related protein kinase R2; AltName: Full=CDK-activating kinase R2; Short=CAK-R2 [Oryza sativa Japonica Group]
Biological context

Connected feature records

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