Feature identity
- Identifier
- PaHa12g09960.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,535 bp
- Genomic location
- 12:35,739,251–35,749,573
- Strand
- +
Hass · mRNA
PaHa12g09960.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,535
- bp
- 12:35,739,251–35,749,573
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g09960
- eggNOG
- Preferred name: REV | Seed ortholog: 337451.A0A443Q0W7 | COG: S | eggNOG OG: Homeodomain@131567|HP-13, Homeodomain@35493|BAJ-23, MEKHLA@131567|A-1, MEKHLA@35493|b-6, START@131567|e-5, START@2759|CL-9, START@3398|Ms-14, START@35493|JK-13
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009855 determination of bilateral symmetry; GO:0009944 polarity specification of adaxial/abaxial axis; GO:0009956 radial pattern formation; GO:0010014 meristem initiation; GO:0010051 xylem and phloem pattern formation; GO:0010089 xylem development; GO:0030154 cell differentiation
- KEGG
- KO: K09338 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g09960.1-protein
derives_frommRNAPaHa12g09960.1
mRNAPaHa12g09960.1
part_ofgenePaHa12g09960
CDS
part_ofPaHa12g09960.1-CDS-12-1787993825:35739251..35739489mRNAPaHa12g09960.1
CDS
part_ofPaHa12g09960.1-CDS-12-1787993825:35739853..35740012mRNAPaHa12g09960.1
CDS
part_ofPaHa12g09960.1-CDS-12-1787993825:35740841..35740926mRNAPaHa12g09960.1
CDS
part_ofPaHa12g09960.1-CDS-12-1787993825:35741039..35741129mRNAPaHa12g09960.1
CDS
part_ofPaHa12g09960.1-CDS-12-1787993825:35741298..35741393mRNAPaHa12g09960.1
CDS
part_ofPaHa12g09960.1-CDS-12-1787993825:35741694..35741807mRNAPaHa12g09960.1
CDS
part_ofPaHa12g09960.1-CDS-12-1787993825:35742065..35742148mRNAPaHa12g09960.1
CDS
part_ofPaHa12g09960.1-CDS-12-1787993825:35742483..35742638mRNAPaHa12g09960.1
CDS
part_ofPaHa12g09960.1-CDS-12-1787993825:35742716..35742790mRNAPaHa12g09960.1
CDS
part_ofPaHa12g09960.1-CDS-12-1787993825:35743111..35743217mRNAPaHa12g09960.1
CDS
part_ofPaHa12g09960.1-CDS-12-1787993825:35743331..35743514mRNAPaHa12g09960.1
CDS
part_ofPaHa12g09960.1-CDS-12-1787993825:35744562..35744750mRNAPaHa12g09960.1
CDS
part_ofPaHa12g09960.1-CDS-12-1787993825:35745898..35745978mRNAPaHa12g09960.1
CDS
part_ofPaHa12g09960.1-CDS-12-1787993825:35747447..35747581mRNAPaHa12g09960.1
CDS
part_ofPaHa12g09960.1-CDS-12-1787993825:35747696..35748021mRNAPaHa12g09960.1
CDS
part_ofPaHa12g09960.1-CDS-12-1787993825:35748815..35748929mRNAPaHa12g09960.1
CDS
part_ofPaHa12g09960.1-CDS-12-1787993825:35749078..35749227mRNAPaHa12g09960.1
CDS
part_ofPaHa12g09960.1-CDS-12-1787993825:35749427..35749573mRNAPaHa12g09960.1
exon
part_ofPaHa12g09960.1-exon-12-1787993825:35739251..35739489mRNAPaHa12g09960.1
exon
part_ofPaHa12g09960.1-exon-12-1787993825:35739853..35740012mRNAPaHa12g09960.1
exon
part_ofPaHa12g09960.1-exon-12-1787993825:35740841..35740926mRNAPaHa12g09960.1
exon
part_ofPaHa12g09960.1-exon-12-1787993825:35741039..35741129mRNAPaHa12g09960.1
exon
part_ofPaHa12g09960.1-exon-12-1787993825:35741298..35741393mRNAPaHa12g09960.1
exon
part_ofPaHa12g09960.1-exon-12-1787993825:35741694..35741807mRNAPaHa12g09960.1
exon
part_ofPaHa12g09960.1-exon-12-1787993825:35742065..35742148mRNAPaHa12g09960.1
exon
part_ofPaHa12g09960.1-exon-12-1787993825:35742483..35742638mRNAPaHa12g09960.1
exon
part_ofPaHa12g09960.1-exon-12-1787993825:35742716..35742790mRNAPaHa12g09960.1
exon
part_ofPaHa12g09960.1-exon-12-1787993825:35743111..35743217mRNAPaHa12g09960.1
exon
part_ofPaHa12g09960.1-exon-12-1787993825:35743331..35743514mRNAPaHa12g09960.1
exon
part_ofPaHa12g09960.1-exon-12-1787993825:35744562..35744750mRNAPaHa12g09960.1
exon
part_ofPaHa12g09960.1-exon-12-1787993825:35745898..35745978mRNAPaHa12g09960.1
exon
part_ofPaHa12g09960.1-exon-12-1787993825:35747447..35747581mRNAPaHa12g09960.1
exon
part_ofPaHa12g09960.1-exon-12-1787993825:35747696..35748021mRNAPaHa12g09960.1
exon
part_ofPaHa12g09960.1-exon-12-1787993825:35748815..35748929mRNAPaHa12g09960.1
exon
part_ofPaHa12g09960.1-exon-12-1787993825:35749078..35749227mRNAPaHa12g09960.1
exon
part_ofPaHa12g09960.1-exon-12-1787993825:35749427..35749573mRNAPaHa12g09960.1
