Chr03.g28275

Functional evidence

eggNOG

4432.XP_010277531.1,A,[pre-mRNA-splicing factor]

Gene Ontology

pre-mRNA-splicing factor | GO:0000350//generation of catalytic spliceosome for second transesterification step; GO:0000375//RNA splicing, via transesterification reactions; GO:0000377//RNA splicing, via transesterification reactions with bulged adenosine as nucleophile; GO:0000393//spliceosomal conformational changes to generate catalytic conformation; GO:0000398//mRNA splicing, via spliceosome; GO:0000956//nuclear-transcribed mRNA catabolic process; GO:0006139//nucleobase-containing compound metabolic process; GO:0006396//RNA processing; GO:0006397//mRNA processing; GO:0006401//RNA catabolic process; GO:0006402//mRNA catabolic process; GO:0006403//RNA localization; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008298//intracellular mRNA localization; GO:0008380//RNA splicing; GO:0009056//catabolic process; GO:0009057//macromolecule catabolic process; GO:0009892//negative regulation of metabolic process; GO:0009987//cellular process; GO:0010467//gene expression; GO:0010468//regulation of gene expression; GO:0010605//negative regulation of macromolecule metabolic process; GO:0010629//negative regulation of gene expression; GO:0016043//cellular component organization; GO:0016070//RNA metabolic process; GO:0016071//mRNA metabolic process; GO:0019222//regulation of metabolic process; GO:0019439//aromatic compound catabolic process; GO:0022607//cellular component assembly; GO:0022613//ribonucleoprotein complex biogenesis; GO:0022618//ribonucleoprotein complex assembly; GO:0033036//macromolecule localization; GO:0034622//cellular macromolecular complex assembly; GO:0034641//cellular nitrogen compound metabolic process; GO:0034655//nucleobase-containing compound catabolic process; GO:0043170//macromolecule metabolic process; GO:0043933//macromolecular complex subunit organization; GO:0044085//cellular component biogenesis; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044248//cellular catabolic process; GO:0044260//cellular macromolecule metabolic process; GO:0044265//cellular macromolecule catabolic process; GO:0044270//cellular nitrogen compound catabolic process; GO:0046483//heterocycle metabolic process; GO:0046700//heterocycle catabolic process; GO:0048519//negative regulation of biological process; GO:0050789//regulation of biological process; GO:0051179//localization; GO:0051641//cellular localization; GO:0060255//regulation of macromolecule metabolic process; GO:0065003//macromolecular complex assembly; GO:0065007//biological regulation; GO:0070727//cellular macromolecule localization; GO:0071025//RNA surveillance; GO:0071027//nuclear RNA surveillance; GO:0071028//nuclear mRNA surveillance; GO:0071030//nuclear mRNA surveillance of spliceosomal pre-mRNA splicing; GO:0071033//nuclear retention of pre-mRNA at the site of transcription; GO:0071048//nuclear retention of unspliced pre-mRNA at the site of transcription; GO:0071704//organic substance metabolic process; GO:0071826//ribonucleoprotein complex subunit organization; GO:0071840//cellular component organization or biogenesis; GO:0090304//nucleic acid metabolic process; GO:1901360//organic cyclic compound metabolic process; GO:1901361//organic cyclic compound catabolic process; GO:1901575//organic substance catabolic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005681//spliceosomal complex; GO:0005682//U5 snRNP; GO:0005684//U2-type spliceosomal complex; GO:0030532//small nuclear ribonucleoprotein complex; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0046540//U4/U6 x U5 tri-snRNP complex; GO:0071020//post-spliceosomal complex; GO:0071021//U2-type post-spliceosomal complex; GO:0097525//spliceosomal snRNP complex; GO:0097526//spliceosomal tri-snRNP complex; GO:1990904//ribonucleoprotein complex | -

KEGG

K12817 | PRPF18, PRP18

NR

RWR77725.1 pre-mRNA-splicing factor 18 [Cinnamomum micranthum f. kanehirae]

Swiss-Prot

Q5EAV6.1 RecName: Full=Pre-mRNA-splicing factor 18; AltName: Full=PRP18 homolog [Xenopus laevis]