Anise · gene

Chr03.g26400

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

8,125
bp
Chr03:61,328,484–61,336,608
genomic location
Record overview

Feature identity

Identifier
Chr03.g26400
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
8,125 bp
Genomic location
Chr03:61,328,484–61,336,608
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010262528.1,K,[Telomere repeat-binding protein]
Gene Ontology
Telomere repeat-binding protein | GO:0000160//phosphorelay signal transduction system; GO:0000723//telomere maintenance; GO:0001101//response to acid chemical; GO:0006139//nucleobase-containing compound metabolic process; GO:0006259//DNA metabolic process; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006950//response to stress; GO:0006970//response to osmotic stress; GO:0006996//organelle organization; GO:0007154//cell communication; GO:0007165//signal transduction; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009628//response to abiotic stimulus; GO:0009651//response to salt stress; GO:0009719//response to endogenous stimulus; GO:0009723//response to ethylene; GO:0009725//response to hormone; GO:0009733//response to auxin; GO:0009737//response to abscisic acid; GO:0009739//response to gibberellin; GO:0009751//response to salicylic acid; GO:0009753//response to jasmonic acid; GO:0009755//hormone-mediated signaling pathway; GO:0009873//ethylene-activated signaling pathway; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010035//response to inorganic substance; GO:0010038//response to metal ion; GO:0014070//response to organic cyclic compound; GO:0016043//cellular component organization; GO:0023052//signaling; GO:0031627//telomeric loop formation; GO:0032200//telomere organization; GO:0032870//cellular response to hormone stimulus; GO:0033993//response to lipid; GO:0034641//cellular nitrogen compound metabolic process; GO:0035556//intracellular signal transduction; GO:0042221//response to chemical; GO:0042493//response to drug; GO:0042592//homeostatic process; GO:0043170//macromolecule metabolic process; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044260//cellular macromolecule metabolic process; GO:0046483//heterocycle metabolic process; GO:0046677//response to antibiotic; GO:0046686//response to cadmium ion; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051276//chromosome organization; GO:0051716//cellular response to stimulus; GO:0060249//anatomical structure homeostasis; GO:0065007//biological regulation; GO:0065008//regulation of biological quality; GO:0070887//cellular response to chemical stimulus; GO:0071310//cellular response to organic substance; GO:0071369//cellular response to ethylene stimulus; GO:0071495//cellular response to endogenous stimulus; GO:0071704//organic substance metabolic process; GO:0071840//cellular component organization or biogenesis; GO:0090304//nucleic acid metabolic process; GO:0097305//response to alcohol; GO:1901360//organic cyclic compound metabolic process; GO:1901700//response to oxygen-containing compound | GO:0000228//nuclear chromosome; GO:0000781//chromosome, telomeric region; GO:0000782//telomere cap complex; GO:0000783//nuclear telomere cap complex; GO:0000784//nuclear chromosome, telomeric region; GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005635//nuclear envelope; GO:0005694//chromosome; GO:0005737//cytoplasm; GO:0005886//plasma membrane; GO:0012505//endomembrane system; GO:0016020//membrane; GO:0031090//organelle membrane; GO:0031965//nuclear membrane; GO:0031967//organelle envelope; GO:0031974//membrane-enclosed lumen; GO:0031975//envelope; GO:0031981//nuclear lumen; GO:0032991//macromolecular complex; GO:0032993//protein-DNA complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043228//non-membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043232//intracellular non-membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044427//chromosomal part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044454//nuclear chromosome part; GO:0044464//cell part; GO:0070013//intracellular organelle lumen; GO:0071944//cell periphery; GO:0098687//chromosomal region | GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003690//double-stranded DNA binding; GO:0003691//double-stranded telomeric DNA binding; GO:0005488//binding; GO:0008301//DNA binding, bending; GO:0042162//telomeric DNA binding; GO:0043565//sequence-specific DNA binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
NR
RWR76720.1 SANT/Myb domain-containing protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9C7B1.1 RecName: Full=Telomere repeat-binding protein 3; AltName: Full=Protein TRF-LIKE 9; AltName: Full=Telomeric DNA-binding protein 2; Short=AtTBP2 [Arabidopsis thaliana]
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.