Anise · gene

Chr03.g25816

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

33,902
bp
Chr03:54,416,994–54,450,895
genomic location
Record overview

Feature identity

Identifier
Chr03.g25816
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
33,902 bp
Genomic location
Chr03:54,416,994–54,450,895
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
3641.EOY06667,L,[pentatricopeptide repeat-containing protein At3g16890]
Gene Ontology
pentatricopeptide repeat-containing protein At3g16890 | GO:0001101//response to acid chemical; GO:0006091//generation of precursor metabolites and energy; GO:0006119//oxidative phosphorylation; GO:0006139//nucleobase-containing compound metabolic process; GO:0006163//purine nucleotide metabolic process; GO:0006725//cellular aromatic compound metabolic process; GO:0006753//nucleoside phosphate metabolic process; GO:0006793//phosphorus metabolic process; GO:0006796//phosphate-containing compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006950//response to stress; GO:0006970//response to osmotic stress; GO:0006979//response to oxidative stress; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009117//nucleotide metabolic process; GO:0009123//nucleoside monophosphate metabolic process; GO:0009126//purine nucleoside monophosphate metabolic process; GO:0009141//nucleoside triphosphate metabolic process; GO:0009144//purine nucleoside triphosphate metabolic process; GO:0009150//purine ribonucleotide metabolic process; GO:0009161//ribonucleoside monophosphate metabolic process; GO:0009167//purine ribonucleoside monophosphate metabolic process; GO:0009199//ribonucleoside triphosphate metabolic process; GO:0009205//purine ribonucleoside triphosphate metabolic process; GO:0009259//ribonucleotide metabolic process; GO:0009451//RNA modification; GO:0009628//response to abiotic stimulus; GO:0009651//response to salt stress; GO:0009719//response to endogenous stimulus; GO:0009725//response to hormone; GO:0009737//response to abscisic acid; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0015980//energy derivation by oxidation of organic compounds; GO:0016070//RNA metabolic process; GO:0016310//phosphorylation; GO:0017144//drug metabolic process; GO:0019637//organophosphate metabolic process; GO:0019693//ribose phosphate metabolic process; GO:0022900//electron transport chain; GO:0022904//respiratory electron transport chain; GO:0033993//response to lipid; GO:0034641//cellular nitrogen compound metabolic process; GO:0042221//response to chemical; GO:0042773//ATP synthesis coupled electron transport; GO:0042775//mitochondrial ATP synthesis coupled electron transport; GO:0043170//macromolecule metabolic process; GO:0043412//macromolecule modification; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044281//small molecule metabolic process; GO:0045333//cellular respiration; GO:0046034//ATP metabolic process; GO:0046483//heterocycle metabolic process; GO:0050896//response to stimulus; GO:0055086//nucleobase-containing small molecule metabolic process; GO:0055114//oxidation-reduction process; GO:0071704//organic substance metabolic process; GO:0072521//purine-containing compound metabolic process; GO:0090304//nucleic acid metabolic process; GO:0090305//nucleic acid phosphodiester bond hydrolysis; GO:0097305//response to alcohol; GO:1901135//carbohydrate derivative metabolic process; GO:1901360//organic cyclic compound metabolic process; GO:1901564//organonitrogen compound metabolic process; GO:1901700//response to oxygen-containing compound | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005737//cytoplasm; GO:0005739//mitochondrion; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044444//cytoplasmic part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003723//RNA binding; GO:0003824//catalytic activity; GO:0004518//nuclease activity; GO:0004519//endonuclease activity; GO:0005488//binding; GO:0016787//hydrolase activity; GO:0016788//hydrolase activity, acting on ester bonds; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
NR
XP_011020445.1 PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Populus euphratica]
Swiss-Prot
Q9LSQ2.1 RecName: Full=Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial; AltName: Full=Protein PENTATRICOPEPTIDE REPEAT 40; Flags: Precursor [Arabidopsis thaliana]
Biological context

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