Anise · gene

Chr03.g25553

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

5,256
bp
Chr03:52,085,626–52,090,881
genomic location
Record overview

Feature identity

Identifier
Chr03.g25553
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
5,256 bp
Genomic location
Chr03:52,085,626–52,090,881
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010270856.1,S,[Pentatricopeptide repeat-containing protein]
Gene Ontology
Pentatricopeptide repeat-containing protein | GO:0000959//mitochondrial RNA metabolic process; GO:0001101//response to acid chemical; GO:0006139//nucleobase-containing compound metabolic process; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006950//response to stress; GO:0006952//defense response; GO:0006970//response to osmotic stress; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0009451//RNA modification; GO:0009605//response to external stimulus; GO:0009607//response to biotic stimulus; GO:0009620//response to fungus; GO:0009628//response to abiotic stimulus; GO:0009651//response to salt stress; GO:0009719//response to endogenous stimulus; GO:0009725//response to hormone; GO:0009737//response to abscisic acid; GO:0009743//response to carbohydrate; GO:0009746//response to hexose; GO:0009749//response to glucose; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0016070//RNA metabolic process; GO:0016071//mRNA metabolic process; GO:0016556//mRNA modification; GO:0033993//response to lipid; GO:0034284//response to monosaccharide; GO:0034641//cellular nitrogen compound metabolic process; GO:0042221//response to chemical; GO:0043170//macromolecule metabolic process; GO:0043207//response to external biotic stimulus; GO:0043412//macromolecule modification; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0046483//heterocycle metabolic process; GO:0050832//defense response to fungus; GO:0050896//response to stimulus; GO:0051704//multi-organism process; GO:0051707//response to other organism; GO:0071704//organic substance metabolic process; GO:0080156//mitochondrial mRNA modification; GO:0090304//nucleic acid metabolic process; GO:0090305//nucleic acid phosphodiester bond hydrolysis; GO:0097305//response to alcohol; GO:0098542//defense response to other organism; GO:1900864//mitochondrial RNA modification; GO:1901360//organic cyclic compound metabolic process; GO:1901700//response to oxygen-containing compound | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005737//cytoplasm; GO:0005739//mitochondrion; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044444//cytoplasmic part; GO:0044464//cell part | GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003723//RNA binding; GO:0003824//catalytic activity; GO:0004518//nuclease activity; GO:0004519//endonuclease activity; GO:0005488//binding; GO:0016787//hydrolase activity; GO:0016788//hydrolase activity, acting on ester bonds; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
NR
XP_010270856.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g56570 [Nelumbo nucifera]
Swiss-Prot
Q9FXA9.1 RecName: Full=Putative pentatricopeptide repeat-containing protein At1g56570 [Arabidopsis thaliana]
Biological context

Connected feature records

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