Anise · gene

Chr03.g22012

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

2,798
bp
Chr03:24,146,485–24,149,282
genomic location
Record overview

Feature identity

Identifier
Chr03.g22012
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
2,798 bp
Genomic location
Chr03:24,146,485–24,149,282
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
13333.ERM99281,B,[WD-40 repeat-containing protein]
Gene Ontology
WD-40 repeat-containing protein | GO:0000003//reproduction; GO:0003006//developmental process involved in reproduction; GO:0006139//nucleobase-containing compound metabolic process; GO:0006323//DNA packaging; GO:0006325//chromatin organization; GO:0006333//chromatin assembly or disassembly; GO:0006338//chromatin remodeling; GO:0006349//regulation of gene expression by genetic imprinting; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006996//organelle organization; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008283//cell proliferation; GO:0009555//pollen development; GO:0009790//embryo development; GO:0009791//post-embryonic development; GO:0009793//embryo development ending in seed dormancy; GO:0009888//tissue development; GO:0009909//regulation of flower development; GO:0009987//cellular process; GO:0010026//trichome differentiation; GO:0010154//fruit development; GO:0010214//seed coat development; GO:0010468//regulation of gene expression; GO:0016043//cellular component organization; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0022414//reproductive process; GO:0022607//cellular component assembly; GO:0030154//cell differentiation; GO:0031323//regulation of cellular metabolic process; GO:0031497//chromatin assembly; GO:0031507//heterochromatin assembly; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0034641//cellular nitrogen compound metabolic process; GO:0040029//regulation of gene expression, epigenetic; GO:0044085//cellular component biogenesis; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0045787//positive regulation of cell cycle; GO:0046483//heterocycle metabolic process; GO:0048229//gametophyte development; GO:0048316//seed development; GO:0048366//leaf development; GO:0048367//shoot system development; GO:0048518//positive regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0048580//regulation of post-embryonic development; GO:0048608//reproductive structure development; GO:0048731//system development; GO:0048827//phyllome development; GO:0048831//regulation of shoot system development; GO:0048856//anatomical structure development; GO:0048869//cellular developmental process; GO:0050789//regulation of biological process; GO:0050793//regulation of developmental process; GO:0050794//regulation of cellular process; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051239//regulation of multicellular organismal process; GO:0051276//chromosome organization; GO:0051726//regulation of cell cycle; GO:0060255//regulation of macromolecule metabolic process; GO:0061458//reproductive system development; GO:0065007//biological regulation; GO:0070828//heterochromatin organization; GO:0071103//DNA conformation change; GO:0071514//genetic imprinting; GO:0071704//organic substance metabolic process; GO:0071840//cellular component organization or biogenesis; GO:0080090//regulation of primary metabolic process; GO:0090558//plant epidermis development; GO:0099402//plant organ development; GO:1901360//organic cyclic compound metabolic process; GO:2000026//regulation of multicellular organismal development; GO:2000241//regulation of reproductive process; GO:2000653//regulation of genetic imprinting | GO:0000151//ubiquitin ligase complex; GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005654//nucleoplasm; GO:0005677//chromatin silencing complex; GO:0005737//cytoplasm; GO:0009507//chloroplast; GO:0009536//plastid; GO:0017053//transcriptional repressor complex; GO:0031461//cullin-RING ubiquitin ligase complex; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0032991//macromolecular complex; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044444//cytoplasmic part; GO:0044446//intracellular organelle part; GO:0044451//nucleoplasm part; GO:0044464//cell part; GO:0070013//intracellular organelle lumen; GO:0080008//Cul4-RING E3 ubiquitin ligase complex; GO:0090568//nuclear transcriptional repressor complex; GO:1902494//catalytic complex; GO:1990234//transferase complex | -
KEGG
K10752 | RBBP4, HAT2, CAF1, MIS16
NR
RWW08199.1 hypothetical protein GW17_00028376 [Ensete ventricosum]
Swiss-Prot
O22467.1 RecName: Full=Histone-binding protein MSI1; AltName: Full=CAF-1 p48 homolog; AltName: Full=Chromatin assembly factor 1 subunit MSI1; Short=CAF-1 subunit MSI1; AltName: Full=Protein MULTICOPY SUPPRESSOR OF IRA 1; Short=AtMSI1; AltName: Full=Protein medicis; AltName: Full=WD-40 repeat-containing protein MSI1 [Arabidopsis thaliana]
Biological context

Connected feature records

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