Feature identity
- Identifier
- PaHa12g12410.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,644 bp
- Genomic location
- 12:40,176,671–40,195,756
- Strand
- −
Hass · mRNA
PaHa12g12410.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,644
- bp
- 12:40,176,671–40,195,756
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g12410
- eggNOG
- Preferred name: LOC103708357 | Seed ortholog: 337451.A0A443Q0F1 | COG: S | eggNOG OG: MFMR@131221|B-2, MFMR@131567|A-1*, MFMR_assoc@131567|A-1*, MFMR_assoc@3398|D-3, bZIP_1@131567|iz-20, bZIP_1@3193|Ell-36, bZIP_1@33090|DGn-33, bZIP_1@3398|Fwx-38
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0009637 response to blue light; GO:0009737 response to abscisic acid; GO:0019760 glucosinolate metabolic process; GO:0043565 sequence-specific DNA binding
- KEGG
- KO: K09060 | Pathway: 04022, 04024, 04148, 04151, 04152, 04211, 04261, 04380, 04612, 04668, 04710, 04713, 04714, 04725, 04728, 04911, 04915, 04916, 04918, 04922, 04924, 04925, 04926, 04927, 04928, 04931, 04934, 04935, 04962, 05016, 05020, 05030, 05031, 05034, 05152, 05161, 05163, 05165, 05166, 05167, 05202, 05203, 05207, 05215 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g12410.1-protein
derives_frommRNAPaHa12g12410.1
mRNAPaHa12g12410.1
part_ofgenePaHa12g12410
CDS
part_ofPaHa12g12410.1-CDS-12-1787993825:40176671..40176901mRNAPaHa12g12410.1
CDS
part_ofPaHa12g12410.1-CDS-12-1787993825:40177830..40177955mRNAPaHa12g12410.1
CDS
part_ofPaHa12g12410.1-CDS-12-1787993825:40178069..40178146mRNAPaHa12g12410.1
CDS
part_ofPaHa12g12410.1-CDS-12-1787993825:40179957..40180219mRNAPaHa12g12410.1
CDS
part_ofPaHa12g12410.1-CDS-12-1787993825:40182346..40182394mRNAPaHa12g12410.1
CDS
part_ofPaHa12g12410.1-CDS-12-1787993825:40182524..40182581mRNAPaHa12g12410.1
CDS
part_ofPaHa12g12410.1-CDS-12-1787993825:40182726..40182886mRNAPaHa12g12410.1
CDS
part_ofPaHa12g12410.1-CDS-12-1787993825:40183009..40183059mRNAPaHa12g12410.1
CDS
part_ofPaHa12g12410.1-CDS-12-1787993825:40183195..40183275mRNAPaHa12g12410.1
CDS
part_ofPaHa12g12410.1-CDS-12-1787993825:40186454..40186546mRNAPaHa12g12410.1
CDS
part_ofPaHa12g12410.1-CDS-12-1787993825:40186653..40186706mRNAPaHa12g12410.1
CDS
part_ofPaHa12g12410.1-CDS-12-1787993825:40187756..40187869mRNAPaHa12g12410.1
CDS
part_ofPaHa12g12410.1-CDS-12-1787993825:40188601..40188703mRNAPaHa12g12410.1
CDS
part_ofPaHa12g12410.1-CDS-12-1787993825:40189073..40189115mRNAPaHa12g12410.1
CDS
part_ofPaHa12g12410.1-CDS-12-1787993825:40195618..40195756mRNAPaHa12g12410.1
exon
part_ofPaHa12g12410.1-exon-12-1787993825:40176671..40176901mRNAPaHa12g12410.1
exon
part_ofPaHa12g12410.1-exon-12-1787993825:40177830..40177955mRNAPaHa12g12410.1
exon
part_ofPaHa12g12410.1-exon-12-1787993825:40178069..40178146mRNAPaHa12g12410.1
exon
part_ofPaHa12g12410.1-exon-12-1787993825:40179957..40180219mRNAPaHa12g12410.1
exon
part_ofPaHa12g12410.1-exon-12-1787993825:40182346..40182394mRNAPaHa12g12410.1
exon
part_ofPaHa12g12410.1-exon-12-1787993825:40182524..40182581mRNAPaHa12g12410.1
exon
part_ofPaHa12g12410.1-exon-12-1787993825:40182726..40182886mRNAPaHa12g12410.1
exon
part_ofPaHa12g12410.1-exon-12-1787993825:40183009..40183059mRNAPaHa12g12410.1
exon
part_ofPaHa12g12410.1-exon-12-1787993825:40183195..40183275mRNAPaHa12g12410.1
exon
part_ofPaHa12g12410.1-exon-12-1787993825:40186454..40186546mRNAPaHa12g12410.1
exon
part_ofPaHa12g12410.1-exon-12-1787993825:40186653..40186706mRNAPaHa12g12410.1
exon
part_ofPaHa12g12410.1-exon-12-1787993825:40187756..40187869mRNAPaHa12g12410.1
exon
part_ofPaHa12g12410.1-exon-12-1787993825:40188601..40188703mRNAPaHa12g12410.1
exon
part_ofPaHa12g12410.1-exon-12-1787993825:40189073..40189115mRNAPaHa12g12410.1
exon
part_ofPaHa12g12410.1-exon-12-1787993825:40195618..40195756mRNAPaHa12g12410.1
