Feature identity
- Identifier
- PaHa12g13420.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,289 bp
- Genomic location
- 12:41,692,588–41,696,675
- Strand
- −
Hass · mRNA
PaHa12g13420.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,289
- bp
- 12:41,692,588–41,696,675
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g13420
- eggNOG
- Preferred name: ARF9 | Seed ortholog: 337451.A0A443Q081 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|qd-19, AUX_IAA@3398|Ami-25, Auxin_resp@131567|A-1*, Auxin_resp@2759|N-4, Auxin_resp@3398|BU-10, B3@131221|yd-19, B3@131567|A-1*, B3@3193|AHu-20, B3@33090|Id-12, B3@3398|BlP-27
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009506 plasmodesma; GO:0042802 identical protein binding
- KEGG
- KO: K14486 | Pathway: 04075 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g13420.1-protein
derives_frommRNAPaHa12g13420.1
mRNAPaHa12g13420.1
part_ofgenePaHa12g13420
CDS
part_ofPaHa12g13420.1-CDS-12-1787993825:41692588..41692729mRNAPaHa12g13420.1
CDS
part_ofPaHa12g13420.1-CDS-12-1787993825:41692819..41693006mRNAPaHa12g13420.1
CDS
part_ofPaHa12g13420.1-CDS-12-1787993825:41693096..41693754mRNAPaHa12g13420.1
CDS
part_ofPaHa12g13420.1-CDS-12-1787993825:41693845..41693998mRNAPaHa12g13420.1
CDS
part_ofPaHa12g13420.1-CDS-12-1787993825:41694106..41694178mRNAPaHa12g13420.1
CDS
part_ofPaHa12g13420.1-CDS-12-1787993825:41694262..41694375mRNAPaHa12g13420.1
CDS
part_ofPaHa12g13420.1-CDS-12-1787993825:41694495..41694659mRNAPaHa12g13420.1
CDS
part_ofPaHa12g13420.1-CDS-12-1787993825:41694757..41694847mRNAPaHa12g13420.1
CDS
part_ofPaHa12g13420.1-CDS-12-1787993825:41695277..41695361mRNAPaHa12g13420.1
CDS
part_ofPaHa12g13420.1-CDS-12-1787993825:41695478..41695630mRNAPaHa12g13420.1
CDS
part_ofPaHa12g13420.1-CDS-12-1787993825:41695746..41695802mRNAPaHa12g13420.1
CDS
part_ofPaHa12g13420.1-CDS-12-1787993825:41695944..41696039mRNAPaHa12g13420.1
CDS
part_ofPaHa12g13420.1-CDS-12-1787993825:41696129..41696247mRNAPaHa12g13420.1
CDS
part_ofPaHa12g13420.1-CDS-12-1787993825:41696338..41696440mRNAPaHa12g13420.1
CDS
part_ofPaHa12g13420.1-CDS-12-1787993825:41696586..41696675mRNAPaHa12g13420.1
exon
part_ofPaHa12g13420.1-exon-12-1787993825:41692588..41692729mRNAPaHa12g13420.1
exon
part_ofPaHa12g13420.1-exon-12-1787993825:41692819..41693006mRNAPaHa12g13420.1
exon
part_ofPaHa12g13420.1-exon-12-1787993825:41693096..41693754mRNAPaHa12g13420.1
exon
part_ofPaHa12g13420.1-exon-12-1787993825:41693845..41693998mRNAPaHa12g13420.1
exon
part_ofPaHa12g13420.1-exon-12-1787993825:41694106..41694178mRNAPaHa12g13420.1
exon
part_ofPaHa12g13420.1-exon-12-1787993825:41694262..41694375mRNAPaHa12g13420.1
exon
part_ofPaHa12g13420.1-exon-12-1787993825:41694495..41694659mRNAPaHa12g13420.1
exon
part_ofPaHa12g13420.1-exon-12-1787993825:41694757..41694847mRNAPaHa12g13420.1
exon
part_ofPaHa12g13420.1-exon-12-1787993825:41695277..41695361mRNAPaHa12g13420.1
exon
part_ofPaHa12g13420.1-exon-12-1787993825:41695478..41695630mRNAPaHa12g13420.1
exon
part_ofPaHa12g13420.1-exon-12-1787993825:41695746..41695802mRNAPaHa12g13420.1
exon
part_ofPaHa12g13420.1-exon-12-1787993825:41695944..41696039mRNAPaHa12g13420.1
exon
part_ofPaHa12g13420.1-exon-12-1787993825:41696129..41696247mRNAPaHa12g13420.1
exon
part_ofPaHa12g13420.1-exon-12-1787993825:41696338..41696440mRNAPaHa12g13420.1
exon
part_ofPaHa12g13420.1-exon-12-1787993825:41696586..41696675mRNAPaHa12g13420.1
