Feature identity
- Identifier
- PaHa12g14180.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,863 bp
- Genomic location
- 12:42,659,707–42,663,544
- Strand
- −
Hass · mRNA
PaHa12g14180.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,863
- bp
- 12:42,659,707–42,663,544
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g14180
- eggNOG
- Preferred name: LOC104612105 | Seed ortholog: 337451.A0A3S3NPX3 | COG: S | eggNOG OG: TCP@131567|A-1*, TCP@2759|F-3, TCP@3398|LC-16, TCP@58023|g-6
- Gene Ontology
- GO:0001216 DNA-binding transcription activator activity; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009733 response to auxin; GO:0009793 embryo development ending in seed dormancy; GO:0010150 leaf senescence; GO:0048366 leaf development; GO:0048825 cotyledon development; GO:0048826 cotyledon morphogenesis; GO:1990837 sequence-specific double-stranded DNA binding
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g14180.1-protein
derives_frommRNAPaHa12g14180.1
mRNAPaHa12g14180.1
part_ofgenePaHa12g14180
CDS
part_ofPaHa12g14180.1-CDS-12-1787993825:42659707..42659843mRNAPaHa12g14180.1
CDS
part_ofPaHa12g14180.1-CDS-12-1787993825:42659940..42660175mRNAPaHa12g14180.1
CDS
part_ofPaHa12g14180.1-CDS-12-1787993825:42660243..42661563mRNAPaHa12g14180.1
CDS
part_ofPaHa12g14180.1-CDS-12-1787993825:42663303..42663426mRNAPaHa12g14180.1
CDS
part_ofPaHa12g14180.1-CDS-12-1787993825:42663500..42663544mRNAPaHa12g14180.1
exon
part_ofPaHa12g14180.1-exon-12-1787993825:42659707..42659843mRNAPaHa12g14180.1
exon
part_ofPaHa12g14180.1-exon-12-1787993825:42659940..42660175mRNAPaHa12g14180.1
exon
part_ofPaHa12g14180.1-exon-12-1787993825:42660243..42661563mRNAPaHa12g14180.1
exon
part_ofPaHa12g14180.1-exon-12-1787993825:42663303..42663426mRNAPaHa12g14180.1
exon
part_ofPaHa12g14180.1-exon-12-1787993825:42663500..42663544mRNAPaHa12g14180.1
