Hass · mRNA

PaHa12g14450.1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

762
bp
12:43,027,239–43,030,146
genomic location
Record overview

Feature identity

Identifier
PaHa12g14450.1
Feature type
mRNA
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
762 bp
Genomic location
12:43,027,239–43,030,146
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: BHLH30 | Seed ortholog: 337451.A0A443P6Y8 | COG: S | eggNOG OG: HLH@131567|OW-12, HLH@3398|BHN-21, HLH@35493|Abn-19
Gene Ontology
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0042802 identical protein binding; GO:0042803 protein homodimerization activity; GO:0046982 protein heterodimerization activity; GO:1990837 sequence-specific double-stranded DNA binding
KEGG
KO: K09092, K22495 | BRITE: 00001, 03000
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.

CDSPaHa12g14450.1-CDS-12-1787993825:43027239..43027706
part_of
CDSPaHa12g14450.1-CDS-12-1787993825:43029853..43030146
part_of
exonPaHa12g14450.1-exon-12-1787993825:43027239..43027706
part_of
exonPaHa12g14450.1-exon-12-1787993825:43029853..43030146
part_of