Chr02.g11396

Functional evidence

eggNOG

42345.XP_008777387.1,A,[RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)]

Gene Ontology

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | GO:0000244//spliceosomal tri-snRNP complex assembly; GO:0000245//spliceosomal complex assembly; GO:0000375//RNA splicing, via transesterification reactions; GO:0000377//RNA splicing, via transesterification reactions with bulged adenosine as nucleophile; GO:0000381//regulation of alternative mRNA splicing, via spliceosome; GO:0000387//spliceosomal snRNP assembly; GO:0000395//mRNA 5'-splice site recognition; GO:0000398//mRNA splicing, via spliceosome; GO:0006139//nucleobase-containing compound metabolic process; GO:0006355//regulation of transcription, DNA-templated; GO:0006376//mRNA splice site selection; GO:0006396//RNA processing; GO:0006397//mRNA processing; GO:0006725//cellular aromatic compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0006810//transport; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008380//RNA splicing; GO:0009889//regulation of biosynthetic process; GO:0009892//negative regulation of metabolic process; GO:0009987//cellular process; GO:0010467//gene expression; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010605//negative regulation of macromolecule metabolic process; GO:0010629//negative regulation of gene expression; GO:0016043//cellular component organization; GO:0016070//RNA metabolic process; GO:0016071//mRNA metabolic process; GO:0016482//cytosolic transport; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0022607//cellular component assembly; GO:0022613//ribonucleoprotein complex biogenesis; GO:0022618//ribonucleoprotein complex assembly; GO:0031323//regulation of cellular metabolic process; GO:0031324//negative regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0033119//negative regulation of RNA splicing; GO:0034622//cellular macromolecular complex assembly; GO:0034641//cellular nitrogen compound metabolic process; GO:0043170//macromolecule metabolic process; GO:0043484//regulation of RNA splicing; GO:0043933//macromolecular complex subunit organization; GO:0044085//cellular component biogenesis; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0045292//mRNA cis splicing, via spliceosome; GO:0045934//negative regulation of nucleobase-containing compound metabolic process; GO:0046483//heterocycle metabolic process; GO:0046907//intracellular transport; GO:0048024//regulation of mRNA splicing, via spliceosome; GO:0048025//negative regulation of mRNA splicing, via spliceosome; GO:0048519//negative regulation of biological process; GO:0048523//negative regulation of cellular process; GO:0050684//regulation of mRNA processing; GO:0050686//negative regulation of mRNA processing; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051172//negative regulation of nitrogen compound metabolic process; GO:0051179//localization; GO:0051234//establishment of localization; GO:0051252//regulation of RNA metabolic process; GO:0051253//negative regulation of RNA metabolic process; GO:0051641//cellular localization; GO:0051649//establishment of localization in cell; GO:0060255//regulation of macromolecule metabolic process; GO:0065003//macromolecular complex assembly; GO:0065007//biological regulation; GO:0071704//organic substance metabolic process; GO:0071826//ribonucleoprotein complex subunit organization; GO:0071840//cellular component organization or biogenesis; GO:0080090//regulation of primary metabolic process; GO:0090304//nucleic acid metabolic process; GO:1901360//organic cyclic compound metabolic process; GO:1903311//regulation of mRNA metabolic process; GO:1903312//negative regulation of mRNA metabolic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005654//nucleoplasm; GO:0005730//nucleolus; GO:0005737//cytoplasm; GO:0005829//cytosol; GO:0005886//plasma membrane; GO:0016020//membrane; GO:0016604//nuclear body; GO:0016607//nuclear speck; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0035061//interchromatin granule; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043228//non-membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043232//intracellular non-membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044444//cytoplasmic part; GO:0044446//intracellular organelle part; GO:0044451//nucleoplasm part; GO:0044464//cell part; GO:0070013//intracellular organelle lumen; GO:0071944//cell periphery | GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003723//RNA binding; GO:0003729//mRNA binding; GO:0005488//binding; GO:0005515//protein binding; GO:0019904//protein domain specific binding; GO:0042802//identical protein binding; GO:0050733//RS domain binding; GO:0051082//unfolded protein binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding

KEGG

K12900 | FUSIP1

NR

RWR72632.1 serine/arginine-rich SC35-like protein splicing factor SCL33 [Cinnamomum micranthum f. kanehirae]

Swiss-Prot

Q9LHP2.1 RecName: Full=Serine/arginine-rich SC35-like splicing factor SCL30A; Short=At-SCL30A; Short=AtSCL30A; AltName: Full=SC35-like splicing factor 30A; AltName: Full=Serine/arginine-rich splicing factor 30A [Arabidopsis thaliana]