Anise · gene

Chr02.g11109

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

2,385
bp
Chr02:12,378,566–12,380,950
genomic location
Record overview

Feature identity

Identifier
Chr02.g11109
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
2,385 bp
Genomic location
Chr02:12,378,566–12,380,950
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010244375.1,S,[zinc finger CCCH domain-containing protein]
Gene Ontology
zinc finger CCCH domain-containing protein | GO:0001101//response to acid chemical; GO:0006355//regulation of transcription, DNA-templated; GO:0006417//regulation of translation; GO:0006950//response to stress; GO:0006979//response to oxidative stress; GO:0007154//cell communication; GO:0007165//signal transduction; GO:0007275//multicellular organism development; GO:0007568//aging; GO:0008150//biological_process; GO:0009719//response to endogenous stimulus; GO:0009725//response to hormone; GO:0009753//response to jasmonic acid; GO:0009755//hormone-mediated signaling pathway; GO:0009867//jasmonic acid mediated signaling pathway; GO:0009889//regulation of biosynthetic process; GO:0009890//negative regulation of biosynthetic process; GO:0009892//negative regulation of metabolic process; GO:0009893//positive regulation of metabolic process; GO:0009894//regulation of catabolic process; GO:0009896//positive regulation of catabolic process; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010150//leaf senescence; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010558//negative regulation of macromolecule biosynthetic process; GO:0010604//positive regulation of macromolecule metabolic process; GO:0010605//negative regulation of macromolecule metabolic process; GO:0010608//posttranscriptional regulation of gene expression; GO:0010629//negative regulation of gene expression; GO:0017148//negative regulation of translation; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0023052//signaling; GO:0031323//regulation of cellular metabolic process; GO:0031324//negative regulation of cellular metabolic process; GO:0031325//positive regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031327//negative regulation of cellular biosynthetic process; GO:0031329//regulation of cellular catabolic process; GO:0031331//positive regulation of cellular catabolic process; GO:0032268//regulation of cellular protein metabolic process; GO:0032269//negative regulation of cellular protein metabolic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0032870//cellular response to hormone stimulus; GO:0034248//regulation of cellular amide metabolic process; GO:0034249//negative regulation of cellular amide metabolic process; GO:0042221//response to chemical; GO:0043487//regulation of RNA stability; GO:0043488//regulation of mRNA stability; GO:0045935//positive regulation of nucleobase-containing compound metabolic process; GO:0048366//leaf development; GO:0048367//shoot system development; GO:0048518//positive regulation of biological process; GO:0048519//negative regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0048523//negative regulation of cellular process; GO:0048731//system development; GO:0048827//phyllome development; GO:0048856//anatomical structure development; GO:0050779//RNA destabilization; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051172//negative regulation of nitrogen compound metabolic process; GO:0051173//positive regulation of nitrogen compound metabolic process; GO:0051246//regulation of protein metabolic process; GO:0051248//negative regulation of protein metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051254//positive regulation of RNA metabolic process; GO:0051716//cellular response to stimulus; GO:0060255//regulation of macromolecule metabolic process; GO:0061013//regulation of mRNA catabolic process; GO:0061014//positive regulation of mRNA catabolic process; GO:0061157//mRNA destabilization; GO:0065007//biological regulation; GO:0065008//regulation of biological quality; GO:0070887//cellular response to chemical stimulus; GO:0071229//cellular response to acid chemical; GO:0071310//cellular response to organic substance; GO:0071395//cellular response to jasmonic acid stimulus; GO:0071495//cellular response to endogenous stimulus; GO:0080090//regulation of primary metabolic process; GO:0090693//plant organ senescence; GO:0099402//plant organ development; GO:1901700//response to oxygen-containing compound; GO:1901701//cellular response to oxygen-containing compound; GO:1903311//regulation of mRNA metabolic process; GO:1903313//positive regulation of mRNA metabolic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2000113//negative regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005737//cytoplasm; GO:0005886//plasma membrane; GO:0016020//membrane; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part; GO:0071944//cell periphery | GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0003723//RNA binding; GO:0003727//single-stranded RNA binding; GO:0005488//binding; GO:0008270//zinc ion binding; GO:0043167//ion binding; GO:0043169//cation binding; GO:0046872//metal ion binding; GO:0046914//transition metal ion binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
NR
RWR72514.1 zinc finger CCCH domain-containing protein 20 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
O82199.1 RecName: Full=Zinc finger CCCH domain-containing protein 20; Short=AtC3H20 [Arabidopsis thaliana]
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.