Feature identity
- Identifier
- PaHa12g15750.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 672 bp
- Genomic location
- 12:46,903,984–46,914,077
- Strand
- +
Hass · mRNA
PaHa12g15750.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 672
- bp
- 12:46,903,984–46,914,077
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa12g15750
- eggNOG
- Preferred name: AG2 | Seed ortholog: 337451.A0A3S3NPP1 | COG: S | eggNOG OG: K-box@131221|b-5, K-box@131567|A-1*, K-box@2759|O-4, K-box@3398|Mi-13, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3398|Aqc-25, SRF-TF@35493|jY-20
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0010047 fruit dehiscence; GO:0010097 specification of stamen identity; GO:0010582 floral meristem determinacy; GO:0046983 protein dimerization activity; GO:0048366 leaf development; GO:0048440 carpel development; GO:0048443 stamen development; GO:0048481 plant ovule development; GO:0048497 maintenance of floral organ identity; GO:0090376 seed trichome differentiation
- KEGG
- KO: K09264 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa12g15750.1-protein
derives_frommRNAPaHa12g15750.1
mRNAPaHa12g15750.1
part_ofgenePaHa12g15750
CDS
part_ofPaHa12g15750.1-CDS-12-1787993825:46903984..46904165mRNAPaHa12g15750.1
CDS
part_ofPaHa12g15750.1-CDS-12-1787993825:46910978..46911059mRNAPaHa12g15750.1
CDS
part_ofPaHa12g15750.1-CDS-12-1787993825:46912910..46912971mRNAPaHa12g15750.1
CDS
part_ofPaHa12g15750.1-CDS-12-1787993825:46913042..46913141mRNAPaHa12g15750.1
CDS
part_ofPaHa12g15750.1-CDS-12-1787993825:46913241..46913282mRNAPaHa12g15750.1
CDS
part_ofPaHa12g15750.1-CDS-12-1787993825:46913750..46913791mRNAPaHa12g15750.1
CDS
part_ofPaHa12g15750.1-CDS-12-1787993825:46913916..46914077mRNAPaHa12g15750.1
exon
part_ofPaHa12g15750.1-exon-12-1787993825:46903984..46904165mRNAPaHa12g15750.1
exon
part_ofPaHa12g15750.1-exon-12-1787993825:46910978..46911059mRNAPaHa12g15750.1
exon
part_ofPaHa12g15750.1-exon-12-1787993825:46912910..46912971mRNAPaHa12g15750.1
exon
part_ofPaHa12g15750.1-exon-12-1787993825:46913042..46913141mRNAPaHa12g15750.1
exon
part_ofPaHa12g15750.1-exon-12-1787993825:46913241..46913282mRNAPaHa12g15750.1
exon
part_ofPaHa12g15750.1-exon-12-1787993825:46913750..46913791mRNAPaHa12g15750.1
exon
part_ofPaHa12g15750.1-exon-12-1787993825:46913916..46914077mRNAPaHa12g15750.1
