Feature identity
- Identifier
- PaHa01g34490.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,512 bp
- Genomic location
- 1:84,990,626–85,013,233
- Strand
- +
Hass · mRNA
PaHa01g34490.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,512
- bp
- 1:84,990,626–85,013,233
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g34490
- eggNOG
- Preferred name: CPRF2 | Seed ortholog: 337451.A0A443NR21 | COG: S | eggNOG OG: bZIP_1@131567|iz-20, bZIP_1@35493|GAp-38, bZIP_C@131567|A-1*, bZIP_C@1437183|e-6, bZIP_C@35493|C-2
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009267 cellular response to starvation; GO:0009649 entrainment of circadian clock; GO:0019900 kinase binding; GO:0042802 identical protein binding; GO:0046982 protein heterodimerization activity; GO:0071215 cellular response to abscisic acid stimulus; GO:0071333 cellular response to glucose stimulus
- KEGG
- KO: K25784 | Pathway: 04022, 04024, 04148, 04151, 04152, 04211, 04261, 04380, 04612, 04668, 04710, 04713, 04714, 04725, 04728, 04911, 04915, 04916, 04918, 04922, 04924, 04925, 04926, 04927, 04928, 04931, 04934, 04935, 04962, 05016, 05020, 05030, 05031, 05034, 05152, 05161, 05163, 05165, 05166, 05167, 05202, 05203, 05207, 05215 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g34490.1-protein
derives_frommRNAPaHa01g34490.1
mRNAPaHa01g34490.1
part_ofgenePaHa01g34490
CDS
part_ofPaHa01g34490.1-CDS-1-1787993825:84990626..84990976mRNAPaHa01g34490.1
CDS
part_ofPaHa01g34490.1-CDS-1-1787993825:84991873..84991963mRNAPaHa01g34490.1
CDS
part_ofPaHa01g34490.1-CDS-1-1787993825:85006008..85006218mRNAPaHa01g34490.1
CDS
part_ofPaHa01g34490.1-CDS-1-1787993825:85007517..85007592mRNAPaHa01g34490.1
CDS
part_ofPaHa01g34490.1-CDS-1-1787993825:85007687..85007812mRNAPaHa01g34490.1
CDS
part_ofPaHa01g34490.1-CDS-1-1787993825:85009913..85010255mRNAPaHa01g34490.1
CDS
part_ofPaHa01g34490.1-CDS-1-1787993825:85011083..85011242mRNAPaHa01g34490.1
CDS
part_ofPaHa01g34490.1-CDS-1-1787993825:85012578..85012723mRNAPaHa01g34490.1
CDS
part_ofPaHa01g34490.1-CDS-1-1787993825:85013226..85013233mRNAPaHa01g34490.1
exon
part_ofPaHa01g34490.1-exon-1-1787993825:84990626..84990976mRNAPaHa01g34490.1
exon
part_ofPaHa01g34490.1-exon-1-1787993825:84991873..84991963mRNAPaHa01g34490.1
exon
part_ofPaHa01g34490.1-exon-1-1787993825:85006008..85006218mRNAPaHa01g34490.1
exon
part_ofPaHa01g34490.1-exon-1-1787993825:85007517..85007592mRNAPaHa01g34490.1
exon
part_ofPaHa01g34490.1-exon-1-1787993825:85007687..85007812mRNAPaHa01g34490.1
exon
part_ofPaHa01g34490.1-exon-1-1787993825:85009913..85010255mRNAPaHa01g34490.1
exon
part_ofPaHa01g34490.1-exon-1-1787993825:85011083..85011242mRNAPaHa01g34490.1
exon
part_ofPaHa01g34490.1-exon-1-1787993825:85012578..85012723mRNAPaHa01g34490.1
exon
part_ofPaHa01g34490.1-exon-1-1787993825:85013226..85013233mRNAPaHa01g34490.1
