Anise · gene

Chr01.g01984

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

2,972
bp
Chr01:24,122,277–24,125,248
genomic location
Record overview

Feature identity

Identifier
Chr01.g01984
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
2,972 bp
Genomic location
Chr01:24,122,277–24,125,248
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010245158.1,K,[transcription factor]
Gene Ontology
transcription factor | GO:0000003//reproduction; GO:0001101//response to acid chemical; GO:0001935//endothelial cell proliferation; GO:0003006//developmental process involved in reproduction; GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006950//response to stress; GO:0006952//defense response; GO:0006970//response to osmotic stress; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0008283//cell proliferation; GO:0009414//response to water deprivation; GO:0009415//response to water; GO:0009605//response to external stimulus; GO:0009607//response to biotic stimulus; GO:0009617//response to bacterium; GO:0009620//response to fungus; GO:0009628//response to abiotic stimulus; GO:0009651//response to salt stress; GO:0009653//anatomical structure morphogenesis; GO:0009719//response to endogenous stimulus; GO:0009723//response to ethylene; GO:0009725//response to hormone; GO:0009733//response to auxin; GO:0009737//response to abscisic acid; GO:0009739//response to gibberellin; GO:0009741//response to brassinosteroid; GO:0009751//response to salicylic acid; GO:0009753//response to jasmonic acid; GO:0009791//post-embryonic development; GO:0009888//tissue development; GO:0009889//regulation of biosynthetic process; GO:0009891//positive regulation of biosynthetic process; GO:0009893//positive regulation of metabolic process; GO:0009908//flower development; GO:0009966//regulation of signal transduction; GO:0009967//positive regulation of signal transduction; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010035//response to inorganic substance; GO:0010038//response to metal ion; GO:0010200//response to chitin; GO:0010243//response to organonitrogen compound; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010557//positive regulation of macromolecule biosynthetic process; GO:0010604//positive regulation of macromolecule metabolic process; GO:0010628//positive regulation of gene expression; GO:0010646//regulation of cell communication; GO:0010647//positive regulation of cell communication; GO:0010928//regulation of auxin mediated signaling pathway; GO:0010929//positive regulation of auxin mediated signaling pathway; GO:0014070//response to organic cyclic compound; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0022414//reproductive process; GO:0023051//regulation of signaling; GO:0023056//positive regulation of signaling; GO:0030154//cell differentiation; GO:0031323//regulation of cellular metabolic process; GO:0031325//positive regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031328//positive regulation of cellular biosynthetic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0032870//cellular response to hormone stimulus; GO:0033993//response to lipid; GO:0035670//plant-type ovary development; GO:0040008//regulation of growth; GO:0042221//response to chemical; GO:0042493//response to drug; GO:0042742//defense response to bacterium; GO:0043207//response to external biotic stimulus; GO:0045893//positive regulation of transcription, DNA-templated; GO:0045935//positive regulation of nucleobase-containing compound metabolic process; GO:0046677//response to antibiotic; GO:0046686//response to cadmium ion; GO:0048367//shoot system development; GO:0048437//floral organ development; GO:0048438//floral whorl development; GO:0048440//carpel development; GO:0048467//gynoecium development; GO:0048481//plant ovule development; GO:0048518//positive regulation of biological process; GO:0048519//negative regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0048523//negative regulation of cellular process; GO:0048532//anatomical structure arrangement; GO:0048579//negative regulation of long-day photoperiodism, flowering; GO:0048580//regulation of post-embryonic development; GO:0048581//negative regulation of post-embryonic development; GO:0048583//regulation of response to stimulus; GO:0048584//positive regulation of response to stimulus; GO:0048585//negative regulation of response to stimulus; GO:0048586//regulation of long-day photoperiodism, flowering; GO:0048608//reproductive structure development; GO:0048638//regulation of developmental growth; GO:0048731//system development; GO:0048827//phyllome development; GO:0048856//anatomical structure development; GO:0048869//cellular developmental process; GO:0050673//epithelial cell proliferation; GO:0050789//regulation of biological process; GO:0050793//regulation of developmental process; GO:0050794//regulation of cellular process; GO:0050832//defense response to fungus; GO:0050896//response to stimulus; GO:0051093//negative regulation of developmental process; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051173//positive regulation of nitrogen compound metabolic process; GO:0051239//regulation of multicellular organismal process; GO:0051241//negative regulation of multicellular organismal process; GO:0051252//regulation of RNA metabolic process; GO:0051254//positive regulation of RNA metabolic process; GO:0051302//regulation of cell division; GO:0051704//multi-organism process; GO:0051707//response to other organism; GO:0051716//cellular response to stimulus; GO:0051782//negative regulation of cell division; GO:0060255//regulation of macromolecule metabolic process; GO:0061458//reproductive system development; GO:0065007//biological regulation; GO:0070887//cellular response to chemical stimulus; GO:0071310//cellular response to organic substance; GO:0071367//cellular response to brassinosteroid stimulus; GO:0071396//cellular response to lipid; GO:0071407//cellular response to organic cyclic compound; GO:0071495//cellular response to endogenous stimulus; GO:0080050//regulation of seed development; GO:0080060//integument development; GO:0080090//regulation of primary metabolic process; GO:0080113//regulation of seed growth; GO:0090567//reproductive shoot system development; GO:0097305//response to alcohol; GO:0098542//defense response to other organism; GO:0099402//plant organ development; GO:1901698//response to nitrogen compound; GO:1901700//response to oxygen-containing compound; GO:1901701//cellular response to oxygen-containing compound; GO:1902680//positive regulation of RNA biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903508//positive regulation of nucleic acid-templated transcription; GO:1904961//quiescent center organization; GO:2000022//regulation of jasmonic acid mediated signaling pathway; GO:2000026//regulation of multicellular organismal development; GO:2000028//regulation of photoperiodism, flowering; GO:2000031//regulation of salicylic acid mediated signaling pathway; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2000241//regulation of reproductive process; GO:2000242//negative regulation of reproductive process; GO:2001023//regulation of response to drug; GO:2001038//regulation of cellular response to drug; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005737//cytoplasm; GO:0005829//cytosol; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044444//cytoplasmic part; GO:0044464//cell part | GO:0000976//transcription regulatory region sequence-specific DNA binding; GO:0000977//RNA polymerase II regulatory region sequence-specific DNA binding; GO:0000978//RNA polymerase II core promoter proximal region sequence-specific DNA binding; GO:0000981//RNA polymerase II transcription factor activity, sequence-specific DNA binding; GO:0000987//core promoter proximal region sequence-specific DNA binding; GO:0000988//transcription factor activity, protein binding; GO:0000989//transcription factor activity, transcription factor binding; GO:0001012//RNA polymerase II regulatory region DNA binding; GO:0001067//regulatory region nucleic acid binding; GO:0001076//transcription factor activity, RNA polymerase II transcription factor binding; GO:0001134//transcription factor activity, transcription factor recruiting; GO:0001135//transcription factor activity, RNA polymerase II transcription factor recruiting; GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003690//double-stranded DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0005515//protein binding; GO:0042802//identical protein binding; GO:0042803//protein homodimerization activity; GO:0043565//sequence-specific DNA binding; GO:0044212//transcription regulatory region DNA binding; GO:0046983//protein dimerization activity; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding; GO:1990837//sequence-specific double-stranded DNA binding
KEGG
K09422 | MYBP
NR
RWR79657.1 SANT/Myb domain-containing protein [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q5NBM8.2 RecName: Full=Transcription factor CSA; AltName: Full=Myb-related protein CSA; AltName: Full=Protein CARBON STARVED ANTHER [Oryza sativa Japonica Group]
Biological context

Connected feature records

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