Anise · gene

Chr01.g01700

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

14,112
bp
Chr01:20,135,697–20,149,808
genomic location
Record overview

Feature identity

Identifier
Chr01.g01700
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
14,112 bp
Genomic location
Chr01:20,135,697–20,149,808
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
4432.XP_010261775.1,A,[Oligouridylate-binding protein]
Gene Ontology
Oligouridylate-binding protein | GO:0006355//regulation of transcription, DNA-templated; GO:0006357//regulation of transcription from RNA polymerase II promoter; GO:0006915//apoptotic process; GO:0006950//response to stress; GO:0006952//defense response; GO:0007154//cell communication; GO:0007165//signal transduction; GO:0007166//cell surface receptor signaling pathway; GO:0007167//enzyme linked receptor protein signaling pathway; GO:0007169//transmembrane receptor protein tyrosine kinase signaling pathway; GO:0008150//biological_process; GO:0008219//cell death; GO:0008543//fibroblast growth factor receptor signaling pathway; GO:0009719//response to endogenous stimulus; GO:0009889//regulation of biosynthetic process; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0012501//programmed cell death; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0023052//signaling; GO:0031323//regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0042221//response to chemical; GO:0044344//cellular response to fibroblast growth factor stimulus; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051716//cellular response to stimulus; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0070848//response to growth factor; GO:0070887//cellular response to chemical stimulus; GO:0071310//cellular response to organic substance; GO:0071363//cellular response to growth factor stimulus; GO:0071495//cellular response to endogenous stimulus; GO:0071774//response to fibroblast growth factor; GO:0080090//regulation of primary metabolic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0000323//lytic vacuole; GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005654//nucleoplasm; GO:0005737//cytoplasm; GO:0005764//lysosome; GO:0005773//vacuole; GO:0010494//cytoplasmic stress granule; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0032991//macromolecular complex; GO:0035770//ribonucleoprotein granule; GO:0036464//cytoplasmic ribonucleoprotein granule; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043228//non-membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043232//intracellular non-membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044428//nuclear part; GO:0044444//cytoplasmic part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0070013//intracellular organelle lumen; GO:1990904//ribonucleoprotein complex | GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003723//RNA binding; GO:0003729//mRNA binding; GO:0005488//binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
KEGG
K13201 | TIA1, TIAL1
NR
RWR79470.1 hypothetical protein CKAN_00804200 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q9LQI9.1 RecName: Full=Oligouridylate-binding protein 1B; Short=AtUBP1b; AltName: Full=Polyuridylate-binding protein UBP1B; Short=Poly(U)-binding protein UBP1B [Arabidopsis thaliana]
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.