Anise · gene

Chr01.g00604

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

17,269
bp
Chr01:6,445,025–6,462,293
genomic location
Record overview

Feature identity

Identifier
Chr01.g00604
Feature type
gene
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
17,269 bp
Genomic location
Chr01:6,445,025–6,462,293
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
42345.XP_008791061.1,E,[Serine palmitoyltransferase 2]
Gene Ontology
Serine palmitoyltransferase 2 | GO:0006066//alcohol metabolic process; GO:0006629//lipid metabolic process; GO:0006643//membrane lipid metabolic process; GO:0006644//phospholipid metabolic process; GO:0006665//sphingolipid metabolic process; GO:0006667//sphinganine metabolic process; GO:0006670//sphingosine metabolic process; GO:0006672//ceramide metabolic process; GO:0006684//sphingomyelin metabolic process; GO:0006686//sphingomyelin biosynthetic process; GO:0006793//phosphorus metabolic process; GO:0006796//phosphate-containing compound metabolic process; GO:0006807//nitrogen compound metabolic process; GO:0007275//multicellular organism development; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008610//lipid biosynthetic process; GO:0008654//phospholipid biosynthetic process; GO:0009058//biosynthetic process; GO:0009314//response to radiation; GO:0009416//response to light stimulus; GO:0009555//pollen development; GO:0009628//response to abiotic stimulus; GO:0009639//response to red or far red light; GO:0009640//photomorphogenesis; GO:0009791//post-embryonic development; GO:0009893//positive regulation of metabolic process; GO:0009894//regulation of catabolic process; GO:0009896//positive regulation of catabolic process; GO:0009987//cellular process; GO:0010506//regulation of autophagy; GO:0010508//positive regulation of autophagy; GO:0010941//regulation of cell death; GO:0016239//positive regulation of macroautophagy; GO:0016241//regulation of macroautophagy; GO:0019222//regulation of metabolic process; GO:0019637//organophosphate metabolic process; GO:0019751//polyol metabolic process; GO:0030148//sphingolipid biosynthetic process; GO:0031323//regulation of cellular metabolic process; GO:0031325//positive regulation of cellular metabolic process; GO:0031329//regulation of cellular catabolic process; GO:0031331//positive regulation of cellular catabolic process; GO:0032501//multicellular organismal process; GO:0032502//developmental process; GO:0034311//diol metabolic process; GO:0034312//diol biosynthetic process; GO:0034641//cellular nitrogen compound metabolic process; GO:0043067//regulation of programmed cell death; GO:0043603//cellular amide metabolic process; GO:0043604//amide biosynthetic process; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044249//cellular biosynthetic process; GO:0044255//cellular lipid metabolic process; GO:0044271//cellular nitrogen compound biosynthetic process; GO:0044281//small molecule metabolic process; GO:0044283//small molecule biosynthetic process; GO:0046165//alcohol biosynthetic process; GO:0046173//polyol biosynthetic process; GO:0046467//membrane lipid biosynthetic process; GO:0046511//sphinganine biosynthetic process; GO:0046512//sphingosine biosynthetic process; GO:0046513//ceramide biosynthetic process; GO:0046519//sphingoid metabolic process; GO:0046520//sphingoid biosynthetic process; GO:0048229//gametophyte development; GO:0048518//positive regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0048856//anatomical structure development; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0065007//biological regulation; GO:0071704//organic substance metabolic process; GO:0090407//organophosphate biosynthetic process; GO:0097164//ammonium ion metabolic process; GO:1901564//organonitrogen compound metabolic process; GO:1901566//organonitrogen compound biosynthetic process; GO:1901576//organic substance biosynthetic process; GO:1901615//organic hydroxy compound metabolic process; GO:1901617//organic hydroxy compound biosynthetic process; GO:1904502//regulation of lipophagy; GO:1904504//positive regulation of lipophagy | GO:0002178//palmitoyltransferase complex; GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005737//cytoplasm; GO:0005773//vacuole; GO:0005783//endoplasmic reticulum; GO:0005789//endoplasmic reticulum membrane; GO:0012505//endomembrane system; GO:0016020//membrane; GO:0017059//serine C-palmitoyltransferase complex; GO:0031211//endoplasmic reticulum palmitoyltransferase complex; GO:0031984//organelle subcompartment; GO:0032991//macromolecular complex; GO:0042175//nuclear outer membrane-endoplasmic reticulum membrane network; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044425//membrane part; GO:0044432//endoplasmic reticulum part; GO:0044444//cytoplasmic part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0098796//membrane protein complex; GO:0098827//endoplasmic reticulum subcompartment; GO:1902494//catalytic complex; GO:1905961//protein-cysteine S-palmitoyltransferase complex; GO:1990234//transferase complex | GO:0003674//molecular_function; GO:0003824//catalytic activity; GO:0004758//serine C-palmitoyltransferase activity; GO:0016408//C-acyltransferase activity; GO:0016409//palmitoyltransferase activity; GO:0016454//C-palmitoyltransferase activity; GO:0016740//transferase activity; GO:0016746//transferase activity, transferring acyl groups; GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups
KEGG
K00654 | SPT
NR
RWR78754.1 long chain base biosynthesis protein 2a [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
Q2R3K3.1 RecName: Full=Long chain base biosynthesis protein 2a [Oryza sativa Japonica Group]
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.