Chr01.g00566

Functional evidence

eggNOG

42345.XP_008811219.1,O,[A domain family that is part of the cupin metalloenzyme superfamily.]

Gene Ontology

A domain family that is part of the cupin metalloenzyme superfamily. | GO:0006081//cellular aldehyde metabolic process; GO:0006325//chromatin organization; GO:0006355//regulation of transcription, DNA-templated; GO:0006464//cellular protein modification process; GO:0006482//protein demethylation; GO:0006807//nitrogen compound metabolic process; GO:0006996//organelle organization; GO:0007154//cell communication; GO:0007165//signal transduction; GO:0008150//biological_process; GO:0008152//metabolic process; GO:0008214//protein dealkylation; GO:0009058//biosynthetic process; GO:0009719//response to endogenous stimulus; GO:0009725//response to hormone; GO:0009755//hormone-mediated signaling pathway; GO:0009889//regulation of biosynthetic process; GO:0009891//positive regulation of biosynthetic process; GO:0009893//positive regulation of metabolic process; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010557//positive regulation of macromolecule biosynthetic process; GO:0010604//positive regulation of macromolecule metabolic process; GO:0010628//positive regulation of gene expression; GO:0014070//response to organic cyclic compound; GO:0016043//cellular component organization; GO:0016569//covalent chromatin modification; GO:0016570//histone modification; GO:0016577//histone demethylation; GO:0016999//antibiotic metabolic process; GO:0017000//antibiotic biosynthetic process; GO:0017144//drug metabolic process; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0019538//protein metabolic process; GO:0023052//signaling; GO:0030518//intracellular steroid hormone receptor signaling pathway; GO:0030521//androgen receptor signaling pathway; GO:0030522//intracellular receptor signaling pathway; GO:0031323//regulation of cellular metabolic process; GO:0031325//positive regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031328//positive regulation of cellular biosynthetic process; GO:0032870//cellular response to hormone stimulus; GO:0033169//histone H3-K9 demethylation; GO:0033993//response to lipid; GO:0036211//protein modification process; GO:0042221//response to chemical; GO:0043170//macromolecule metabolic process; GO:0043401//steroid hormone mediated signaling pathway; GO:0043412//macromolecule modification; GO:0044237//cellular metabolic process; GO:0044238//primary metabolic process; GO:0044249//cellular biosynthetic process; GO:0044260//cellular macromolecule metabolic process; GO:0044267//cellular protein metabolic process; GO:0044281//small molecule metabolic process; GO:0044283//small molecule biosynthetic process; GO:0045893//positive regulation of transcription, DNA-templated; GO:0045935//positive regulation of nucleobase-containing compound metabolic process; GO:0046184//aldehyde biosynthetic process; GO:0046292//formaldehyde metabolic process; GO:0046293//formaldehyde biosynthetic process; GO:0048518//positive regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0048545//response to steroid hormone; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051173//positive regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051254//positive regulation of RNA metabolic process; GO:0051276//chromosome organization; GO:0051716//cellular response to stimulus; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0070076//histone lysine demethylation; GO:0070887//cellular response to chemical stimulus; GO:0070988//demethylation; GO:0071310//cellular response to organic substance; GO:0071383//cellular response to steroid hormone stimulus; GO:0071396//cellular response to lipid; GO:0071407//cellular response to organic cyclic compound; GO:0071495//cellular response to endogenous stimulus; GO:0071704//organic substance metabolic process; GO:0071840//cellular component organization or biogenesis; GO:0080090//regulation of primary metabolic process; GO:1901564//organonitrogen compound metabolic process; GO:1901576//organic substance biosynthetic process; GO:1902680//positive regulation of RNA biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903508//positive regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0000785//chromatin; GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005654//nucleoplasm; GO:0005694//chromosome; GO:0031974//membrane-enclosed lumen; GO:0031981//nuclear lumen; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043228//non-membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0043232//intracellular non-membrane-bounded organelle; GO:0043233//organelle lumen; GO:0044422//organelle part; GO:0044424//intracellular part; GO:0044427//chromosomal part; GO:0044428//nuclear part; GO:0044446//intracellular organelle part; GO:0044464//cell part; GO:0070013//intracellular organelle lumen | GO:0000976//transcription regulatory region sequence-specific DNA binding; GO:0001067//regulatory region nucleic acid binding; GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003682//chromatin binding; GO:0003690//double-stranded DNA binding; GO:0003824//catalytic activity; GO:0005102//receptor binding; GO:0005488//binding; GO:0005506//iron ion binding; GO:0005515//protein binding; GO:0008134//transcription factor binding; GO:0031490//chromatin DNA binding; GO:0032451//demethylase activity; GO:0032452//histone demethylase activity; GO:0032454//histone demethylase activity (H3-K9 specific); GO:0035257//nuclear hormone receptor binding; GO:0035258//steroid hormone receptor binding; GO:0043167//ion binding; GO:0043169//cation binding; GO:0043565//sequence-specific DNA binding; GO:0044212//transcription regulatory region DNA binding; GO:0046872//metal ion binding; GO:0046914//transition metal ion binding; GO:0050681//androgen receptor binding; GO:0051427//hormone receptor binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding; GO:1990837//sequence-specific double-stranded DNA binding

KEGG

K15601 | KDM3

NR

RWR78727.1 lysine-specific demethylase JMJ25 isoform X1 [Cinnamomum micranthum f. kanehirae]

Swiss-Prot

Q9SSE9.1 RecName: Full=Lysine-specific demethylase JMJ25; AltName: Full=Jumonji domain-containing protein 25; AltName: Full=Lysine-specific histone demethylase JMJ25; AltName: Full=Protein INCREASE IN BONSAI METHYLATION 1; AltName: Full=Protein JUMONJI 25 [Arabidopsis thaliana]