Feature identity
- Identifier
- PaHa01g34820.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,233 bp
- Genomic location
- 1:87,460,552–87,463,307
- Strand
- +
Hass · mRNA
PaHa01g34820.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,233
- bp
- 1:87,460,552–87,463,307
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g34820
- eggNOG
- Preferred name: LOC112289255 | Seed ortholog: 337451.A0A3S3N558 | COG: S | eggNOG OG: zf-C2H2@131567|qO-18, zf-C2H2@2759|AFG-19, zf-C2H2@3193|NKa-33
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009937 regulation of gibberellic acid mediated signaling pathway; GO:0010336 gibberellic acid homeostasis
- KEGG
- KO: K25869, K25870 | Pathway: 04391, 05168 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g34820.1-protein
derives_frommRNAPaHa01g34820.1
mRNAPaHa01g34820.1
part_ofgenePaHa01g34820
CDS
part_ofPaHa01g34820.1-CDS-1-1787993825:87460552..87460708mRNAPaHa01g34820.1
CDS
part_ofPaHa01g34820.1-CDS-1-1787993825:87460821..87461214mRNAPaHa01g34820.1
CDS
part_ofPaHa01g34820.1-CDS-1-1787993825:87462626..87463307mRNAPaHa01g34820.1
exon
part_ofPaHa01g34820.1-exon-1-1787993825:87460552..87460708mRNAPaHa01g34820.1
exon
part_ofPaHa01g34820.1-exon-1-1787993825:87460821..87461214mRNAPaHa01g34820.1
exon
part_ofPaHa01g34820.1-exon-1-1787993825:87462626..87463307mRNAPaHa01g34820.1
