Anise · mRNA

Chr10.g72785.m1

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

814
bp
Chr10:42,819,046–42,822,700
genomic location
Record overview

Feature identity

Identifier
Chr10.g72785.m1
Feature type
mRNA
Genome collection
Anise
Organism
Persea americana-Anise
Sequence length
814 bp
Genomic location
Chr10:42,819,046–42,822,700
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
3711.Bra022176.1-P,K,[Transcription factor]
Gene Ontology
Transcription factor | GO:0000160//phosphorelay signal transduction system; GO:0001101//response to acid chemical; GO:0006355//regulation of transcription, DNA-templated; GO:0006950//response to stress; GO:0007154//cell communication; GO:0007165//signal transduction; GO:0008150//biological_process; GO:0008219//cell death; GO:0009266//response to temperature stimulus; GO:0009408//response to heat; GO:0009605//response to external stimulus; GO:0009607//response to biotic stimulus; GO:0009628//response to abiotic stimulus; GO:0009719//response to endogenous stimulus; GO:0009723//response to ethylene; GO:0009725//response to hormone; GO:0009735//response to cytokinin; GO:0009753//response to jasmonic acid; GO:0009755//hormone-mediated signaling pathway; GO:0009873//ethylene-activated signaling pathway; GO:0009889//regulation of biosynthetic process; GO:0009891//positive regulation of biosynthetic process; GO:0009893//positive regulation of metabolic process; GO:0009987//cellular process; GO:0010033//response to organic substance; GO:0010286//heat acclimation; GO:0010468//regulation of gene expression; GO:0010556//regulation of macromolecule biosynthetic process; GO:0010557//positive regulation of macromolecule biosynthetic process; GO:0010604//positive regulation of macromolecule metabolic process; GO:0010628//positive regulation of gene expression; GO:0019219//regulation of nucleobase-containing compound metabolic process; GO:0019222//regulation of metabolic process; GO:0023052//signaling; GO:0031323//regulation of cellular metabolic process; GO:0031325//positive regulation of cellular metabolic process; GO:0031326//regulation of cellular biosynthetic process; GO:0031328//positive regulation of cellular biosynthetic process; GO:0032870//cellular response to hormone stimulus; GO:0035556//intracellular signal transduction; GO:0042221//response to chemical; GO:0043207//response to external biotic stimulus; GO:0045893//positive regulation of transcription, DNA-templated; GO:0045935//positive regulation of nucleobase-containing compound metabolic process; GO:0048518//positive regulation of biological process; GO:0048522//positive regulation of cellular process; GO:0050789//regulation of biological process; GO:0050794//regulation of cellular process; GO:0050896//response to stimulus; GO:0051171//regulation of nitrogen compound metabolic process; GO:0051173//positive regulation of nitrogen compound metabolic process; GO:0051252//regulation of RNA metabolic process; GO:0051254//positive regulation of RNA metabolic process; GO:0051704//multi-organism process; GO:0051707//response to other organism; GO:0051716//cellular response to stimulus; GO:0060255//regulation of macromolecule metabolic process; GO:0065007//biological regulation; GO:0070887//cellular response to chemical stimulus; GO:0071310//cellular response to organic substance; GO:0071369//cellular response to ethylene stimulus; GO:0071495//cellular response to endogenous stimulus; GO:0080090//regulation of primary metabolic process; GO:1901700//response to oxygen-containing compound; GO:1902680//positive regulation of RNA biosynthetic process; GO:1903506//regulation of nucleic acid-templated transcription; GO:1903508//positive regulation of nucleic acid-templated transcription; GO:2000112//regulation of cellular macromolecule biosynthetic process; GO:2001141//regulation of RNA biosynthetic process | GO:0005575//cellular_component; GO:0005622//intracellular; GO:0005623//cell; GO:0005634//nucleus; GO:0005737//cytoplasm; GO:0005886//plasma membrane; GO:0016020//membrane; GO:0043226//organelle; GO:0043227//membrane-bounded organelle; GO:0043229//intracellular organelle; GO:0043231//intracellular membrane-bounded organelle; GO:0044424//intracellular part; GO:0044464//cell part; GO:0071944//cell periphery | GO:0003674//molecular_function; GO:0003676//nucleic acid binding; GO:0003677//DNA binding; GO:0003700//transcription factor activity, sequence-specific DNA binding; GO:0005488//binding; GO:0043565//sequence-specific DNA binding; GO:0097159//organic cyclic compound binding; GO:1901363//heterocyclic compound binding
KEGG
K09286 | EREBP
NR
RWR94196.1 putative ethylene responsive element binding protein 2 [Cinnamomum micranthum f. kanehirae]
Swiss-Prot
P42736.2 RecName: Full=Ethylene-responsive transcription factor RAP2-3; AltName: Full=Cadmium-induced protein AS30; AltName: Full=Ethylene response factor 72; Short=ERF72; AltName: Full=Ethylene-responsive element binding protein; Short=AtEBP; AltName: Full=Protein RELATED TO APETALA2 3; Short=Related to AP2 3 [Arabidopsis thaliana]
Biological context

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