Feature identity
- Identifier
- PaHa_c119g00570.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,611 bp
- Genomic location
- unplaced_contig_119:55,833–57,650
- Strand
- −
Hass · mRNA
PaHa_c119g00570.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,611
- bp
- unplaced_contig_119:55,833–57,650
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c119g00570
- eggNOG
- Preferred name: FG01100.1 | Seed ortholog: 1126212.K2S1D9 | eggNOG OG: Homeodomain@131567|KC-14
- Gene Ontology
- GO:0001556 oocyte maturation; GO:0002229 defense response to oomycetes; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006952 defense response; GO:0008340 determination of adult lifespan; GO:0008354 primordial germ cell migration; GO:0008544 epidermis development; GO:0009414 response to water deprivation; GO:0009507 chloroplast; GO:0009620 response to fungus; GO:0009682 induced systemic resistance; GO:0009737 response to abscisic acid; GO:0009738 abscisic acid-activated signaling pathway; GO:0009787 regulation of abscisic acid-activated signaling pathway; GO:0009867 jasmonic acid mediated signaling pathway; GO:0010118 stomatal movement; GO:0030728 ovulation; GO:0031347 regulation of defense response; GO:0042742 defense response to bacterium; GO:0050832 defense response to fungus; GO:1900194 negative regulation of oocyte maturation; GO:2000022 regulation of jasmonic acid mediated signaling pathway; GO:2000071 regulation of defense response by callose deposition
- KEGG
- KO: K09364, K09366, K09368, K24895 | BRITE: 00001, 03000, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c119g00570.1-protein
derives_fromgenePaHa_c119g00570
CDS
part_ofPaHa_c119g00570.1-CDS-unplaced_contig_119-1787993825:55833..57158CDS
part_ofPaHa_c119g00570.1-CDS-unplaced_contig_119-1787993825:57238..57349CDS
part_ofPaHa_c119g00570.1-CDS-unplaced_contig_119-1787993825:57478..57650exon
part_ofPaHa_c119g00570.1-exon-unplaced_contig_119-1787993825:55833..57158exon
part_ofPaHa_c119g00570.1-exon-unplaced_contig_119-1787993825:57238..57349exon
part_ofPaHa_c119g00570.1-exon-unplaced_contig_119-1787993825:57478..57650